BLASTX nr result
ID: Atractylodes21_contig00031224
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00031224 (268 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-26 ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi... 96 1e-25 ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|2... 94 2e-25 ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 96 2e-25 ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containi... 89 1e-23 >ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530-like [Glycine max] Length = 579 Score = 97.1 bits (240), Expect(2) = 3e-26 Identities = 45/63 (71%), Positives = 52/63 (82%) Frame = -2 Query: 192 LNMYSSAGNWEKVIEMRKLMKEKGIQTTPSASTIEVKGEIHEFRVDDTSHSRINEVYEMM 13 LN+YSSAG+WEKV E+RKLMK K IQTTP STIE+KG +HEF VDD SHSR E+YE + Sbjct: 417 LNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETL 476 Query: 12 DEI 4 DEI Sbjct: 477 DEI 479 Score = 46.6 bits (109), Expect(2) = 3e-26 Identities = 23/25 (92%), Positives = 23/25 (92%) Frame = -3 Query: 266 VALGERVIEHLIELKAQEAGDYVLL 192 V LGERVI HLIELKAQEAGDYVLL Sbjct: 392 VTLGERVIGHLIELKAQEAGDYVLL 416 >ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Vitis vinifera] Length = 643 Score = 96.3 bits (238), Expect(2) = 1e-25 Identities = 42/63 (66%), Positives = 53/63 (84%) Frame = -2 Query: 192 LNMYSSAGNWEKVIEMRKLMKEKGIQTTPSASTIEVKGEIHEFRVDDTSHSRINEVYEMM 13 LN+YSS GNW+KV ++RK MKEKGIQT+P STIE+KG++HEF VDD H R +E+YEM+ Sbjct: 481 LNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEML 540 Query: 12 DEI 4 DEI Sbjct: 541 DEI 543 Score = 45.1 bits (105), Expect(2) = 1e-25 Identities = 22/23 (95%), Positives = 22/23 (95%) Frame = -3 Query: 260 LGERVIEHLIELKAQEAGDYVLL 192 LGERVI HLIELKAQEAGDYVLL Sbjct: 458 LGERVIGHLIELKAQEAGDYVLL 480 >ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa] Length = 499 Score = 94.4 bits (233), Expect(2) = 2e-25 Identities = 41/62 (66%), Positives = 54/62 (87%) Frame = -2 Query: 189 NMYSSAGNWEKVIEMRKLMKEKGIQTTPSASTIEVKGEIHEFRVDDTSHSRINEVYEMMD 10 N+YSS NW+KV E+RK MKEKGIQTTP++S+IE+KG++HEF VDD SH + +E+YEM+D Sbjct: 338 NLYSSVDNWKKVTELRKFMKEKGIQTTPASSSIELKGKVHEFVVDDVSHPQKDEIYEMLD 397 Query: 9 EI 4 EI Sbjct: 398 EI 399 Score = 46.6 bits (109), Expect(2) = 2e-25 Identities = 22/25 (88%), Positives = 23/25 (92%) Frame = -3 Query: 266 VALGERVIEHLIELKAQEAGDYVLL 192 V LGE V+EHLIELKAQEAGDYVLL Sbjct: 312 VILGEHVVEHLIELKAQEAGDYVLL 336 >ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g47530-like [Glycine max] Length = 515 Score = 95.9 bits (237), Expect(2) = 2e-25 Identities = 44/63 (69%), Positives = 53/63 (84%) Frame = -2 Query: 192 LNMYSSAGNWEKVIEMRKLMKEKGIQTTPSASTIEVKGEIHEFRVDDTSHSRINEVYEMM 13 LN+YSSAG+WEKV E+RKLMK K IQTTP STIE+KG +HEF VDD SH+R +E+YE + Sbjct: 353 LNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGVVHEFVVDDVSHTRNHEIYETL 412 Query: 12 DEI 4 DEI Sbjct: 413 DEI 415 Score = 44.7 bits (104), Expect(2) = 2e-25 Identities = 22/25 (88%), Positives = 23/25 (92%) Frame = -3 Query: 266 VALGERVIEHLIELKAQEAGDYVLL 192 V LGERVI HLIELKAQEAGD+VLL Sbjct: 328 VTLGERVIGHLIELKAQEAGDHVLL 352 >ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530-like [Cucumis sativus] Length = 602 Score = 89.0 bits (219), Expect(2) = 1e-23 Identities = 39/63 (61%), Positives = 51/63 (80%) Frame = -2 Query: 192 LNMYSSAGNWEKVIEMRKLMKEKGIQTTPSASTIEVKGEIHEFRVDDTSHSRINEVYEMM 13 LN+YSSAGNW+KV E+RKLMKEKGI TTP +TIE+ G +H+F VDD SH +++Y+ + Sbjct: 440 LNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQL 499 Query: 12 DEI 4 DEI Sbjct: 500 DEI 502 Score = 45.8 bits (107), Expect(2) = 1e-23 Identities = 20/23 (86%), Positives = 23/23 (100%) Frame = -3 Query: 260 LGERVIEHLIELKAQEAGDYVLL 192 LGER++EHLIELK+QEAGDYVLL Sbjct: 417 LGERIVEHLIELKSQEAGDYVLL 439