BLASTX nr result

ID: Atractylodes21_contig00031224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031224
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi...    97   3e-26
ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...    96   1e-25
ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-25
ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    96   2e-25
ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containi...    89   1e-23

>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Glycine max]
          Length = 579

 Score = 97.1 bits (240), Expect(2) = 3e-26
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = -2

Query: 192 LNMYSSAGNWEKVIEMRKLMKEKGIQTTPSASTIEVKGEIHEFRVDDTSHSRINEVYEMM 13
           LN+YSSAG+WEKV E+RKLMK K IQTTP  STIE+KG +HEF VDD SHSR  E+YE +
Sbjct: 417 LNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETL 476

Query: 12  DEI 4
           DEI
Sbjct: 477 DEI 479



 Score = 46.6 bits (109), Expect(2) = 3e-26
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = -3

Query: 266 VALGERVIEHLIELKAQEAGDYVLL 192
           V LGERVI HLIELKAQEAGDYVLL
Sbjct: 392 VTLGERVIGHLIELKAQEAGDYVLL 416


>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score = 96.3 bits (238), Expect(2) = 1e-25
 Identities = 42/63 (66%), Positives = 53/63 (84%)
 Frame = -2

Query: 192 LNMYSSAGNWEKVIEMRKLMKEKGIQTTPSASTIEVKGEIHEFRVDDTSHSRINEVYEMM 13
           LN+YSS GNW+KV ++RK MKEKGIQT+P  STIE+KG++HEF VDD  H R +E+YEM+
Sbjct: 481 LNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEML 540

Query: 12  DEI 4
           DEI
Sbjct: 541 DEI 543



 Score = 45.1 bits (105), Expect(2) = 1e-25
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = -3

Query: 260 LGERVIEHLIELKAQEAGDYVLL 192
           LGERVI HLIELKAQEAGDYVLL
Sbjct: 458 LGERVIGHLIELKAQEAGDYVLL 480


>ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|222841696|gb|EEE79243.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score = 94.4 bits (233), Expect(2) = 2e-25
 Identities = 41/62 (66%), Positives = 54/62 (87%)
 Frame = -2

Query: 189 NMYSSAGNWEKVIEMRKLMKEKGIQTTPSASTIEVKGEIHEFRVDDTSHSRINEVYEMMD 10
           N+YSS  NW+KV E+RK MKEKGIQTTP++S+IE+KG++HEF VDD SH + +E+YEM+D
Sbjct: 338 NLYSSVDNWKKVTELRKFMKEKGIQTTPASSSIELKGKVHEFVVDDVSHPQKDEIYEMLD 397

Query: 9   EI 4
           EI
Sbjct: 398 EI 399



 Score = 46.6 bits (109), Expect(2) = 2e-25
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = -3

Query: 266 VALGERVIEHLIELKAQEAGDYVLL 192
           V LGE V+EHLIELKAQEAGDYVLL
Sbjct: 312 VILGEHVVEHLIELKAQEAGDYVLL 336


>ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g47530-like [Glycine max]
          Length = 515

 Score = 95.9 bits (237), Expect(2) = 2e-25
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = -2

Query: 192 LNMYSSAGNWEKVIEMRKLMKEKGIQTTPSASTIEVKGEIHEFRVDDTSHSRINEVYEMM 13
           LN+YSSAG+WEKV E+RKLMK K IQTTP  STIE+KG +HEF VDD SH+R +E+YE +
Sbjct: 353 LNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGVVHEFVVDDVSHTRNHEIYETL 412

Query: 12  DEI 4
           DEI
Sbjct: 413 DEI 415



 Score = 44.7 bits (104), Expect(2) = 2e-25
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = -3

Query: 266 VALGERVIEHLIELKAQEAGDYVLL 192
           V LGERVI HLIELKAQEAGD+VLL
Sbjct: 328 VTLGERVIGHLIELKAQEAGDHVLL 352


>ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Cucumis sativus]
          Length = 602

 Score = 89.0 bits (219), Expect(2) = 1e-23
 Identities = 39/63 (61%), Positives = 51/63 (80%)
 Frame = -2

Query: 192 LNMYSSAGNWEKVIEMRKLMKEKGIQTTPSASTIEVKGEIHEFRVDDTSHSRINEVYEMM 13
           LN+YSSAGNW+KV E+RKLMKEKGI TTP  +TIE+ G +H+F VDD SH   +++Y+ +
Sbjct: 440 LNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQL 499

Query: 12  DEI 4
           DEI
Sbjct: 500 DEI 502



 Score = 45.8 bits (107), Expect(2) = 1e-23
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = -3

Query: 260 LGERVIEHLIELKAQEAGDYVLL 192
           LGER++EHLIELK+QEAGDYVLL
Sbjct: 417 LGERIVEHLIELKSQEAGDYVLL 439


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