BLASTX nr result

ID: Atractylodes21_contig00031079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031079
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002876049.1| clathrin adaptor complex small chain family ...    74   1e-11
ref|NP_190655.2| AP-3 complex subunit sigma [Arabidopsis thalian...    73   2e-11
ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis...    71   1e-10
ref|XP_004142366.1| PREDICTED: AP-3 complex subunit sigma-like [...    70   2e-10
ref|NP_001236188.1| uncharacterized protein LOC100306517 [Glycin...    69   3e-10

>ref|XP_002876049.1| clathrin adaptor complex small chain family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297321887|gb|EFH52308.1|
           clathrin adaptor complex small chain family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 166

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/53 (66%), Positives = 45/53 (84%)
 Frame = +2

Query: 2   KVHTILDEIILGGQVVEMSSSEVVKAVDDISWLERNSNSILGVPKSMSGWQGR 160
           K+H +LDEI+ GGQV+E SS+EV+KAV++IS LE  SNSI  VPKS+SGW+GR
Sbjct: 114 KMHAVLDEIVFGGQVLETSSAEVIKAVEEISKLEAASNSISLVPKSVSGWRGR 166


>ref|NP_190655.2| AP-3 complex subunit sigma [Arabidopsis thaliana]
           gi|75161581|sp|Q8VZ37.1|AP3S_ARATH RecName: Full=AP-3
           complex subunit sigma; AltName: Full=AP-3 complex
           subunit sigma-3; AltName: Full=Adapter-related protein
           complex 3 sigma subunit; AltName: Full=Sigma-adaptin 3;
           AltName: Full=Sigma3-adaptin gi|17529106|gb|AAL38763.1|
           putative clathrin coat assembly protein [Arabidopsis
           thaliana] gi|20465749|gb|AAM20343.1| putative clathrin
           coat assembly protein [Arabidopsis thaliana]
           gi|332645198|gb|AEE78719.1| AP-3 complex subunit sigma
           [Arabidopsis thaliana]
          Length = 166

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/53 (66%), Positives = 45/53 (84%)
 Frame = +2

Query: 2   KVHTILDEIILGGQVVEMSSSEVVKAVDDISWLERNSNSILGVPKSMSGWQGR 160
           K+H +LDEI+ GGQV+E SS+EV+KAV++IS LE  SNSI  VPKS+SGW+GR
Sbjct: 114 KMHAVLDEIVFGGQVLETSSAEVMKAVEEISKLEAASNSISLVPKSVSGWRGR 166


>ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis vinifera]
           gi|297735157|emb|CBI17519.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/51 (68%), Positives = 44/51 (86%)
 Frame = +2

Query: 2   KVHTILDEIILGGQVVEMSSSEVVKAVDDISWLERNSNSILGVPKSMSGWQ 154
           K+HTILDEII GGQV+E SS+EV+KAV++IS LE  SN+I  VPKS+SGW+
Sbjct: 114 KLHTILDEIIFGGQVLETSSAEVMKAVEEISRLETASNTITLVPKSISGWR 164


>ref|XP_004142366.1| PREDICTED: AP-3 complex subunit sigma-like [Cucumis sativus]
           gi|449521621|ref|XP_004167828.1| PREDICTED: AP-3 complex
           subunit sigma-like [Cucumis sativus]
          Length = 165

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/52 (69%), Positives = 44/52 (84%)
 Frame = +2

Query: 2   KVHTILDEIILGGQVVEMSSSEVVKAVDDISWLERNSNSILGVPKSMSGWQG 157
           K+HTILDEII GGQV+E SSSEV+KAV++IS LE  SNSI  V K++SGW+G
Sbjct: 114 KMHTILDEIISGGQVLETSSSEVMKAVEEISKLETASNSINFVSKTVSGWRG 165


>ref|NP_001236188.1| uncharacterized protein LOC100306517 [Glycine max]
           gi|255628757|gb|ACU14723.1| unknown [Glycine max]
          Length = 166

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/53 (64%), Positives = 45/53 (84%)
 Frame = +2

Query: 2   KVHTILDEIILGGQVVEMSSSEVVKAVDDISWLERNSNSILGVPKSMSGWQGR 160
           K+HTILDEIILGGQV+E SS+EV+KA+++IS LE  S +I  VPKS+SGW+ +
Sbjct: 114 KMHTILDEIILGGQVLETSSNEVMKAIEEISRLESASKAINLVPKSVSGWRSQ 166


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