BLASTX nr result

ID: Atractylodes21_contig00031047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031047
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...   116   2e-24
ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245...   115   5e-24
emb|CAN68836.1| hypothetical protein VITISV_026310 [Vitis vinifera]   115   5e-24
dbj|BAD33090.1| putative RNA-binding protein RBP37 [Oryza sativa...   114   6e-24
dbj|BAD33089.1| putative RNA-binding protein RBP37 [Oryza sativa...   114   6e-24

>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
           gi|223541913|gb|EEF43459.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 379

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/62 (91%), Positives = 58/62 (93%)
 Frame = -3

Query: 283 VYRLRMLGDYHHSTRIAFVEFVMAESAIAALNCSGAVLGCLPIRVSPSKTPVRPRAPRSN 104
           VYRLR+LGDYHHSTRIAFVEFVMAESAIAALNCSG VLG LPIRVSPSKTPVRPRAPR  
Sbjct: 318 VYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRIP 377

Query: 103 MH 98
           MH
Sbjct: 378 MH 379


>ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
           gi|302143972|emb|CBI23077.3| unnamed protein product
           [Vitis vinifera]
          Length = 361

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/62 (88%), Positives = 59/62 (95%)
 Frame = -3

Query: 283 VYRLRMLGDYHHSTRIAFVEFVMAESAIAALNCSGAVLGCLPIRVSPSKTPVRPRAPRSN 104
           V+RLR+LGDYHHSTRIAFVEFVMAESAIAALNCSGA+LG LPIRVSPSKTPVRPRAPR  
Sbjct: 300 VHRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGAILGSLPIRVSPSKTPVRPRAPRPA 359

Query: 103 MH 98
           +H
Sbjct: 360 LH 361


>emb|CAN68836.1| hypothetical protein VITISV_026310 [Vitis vinifera]
          Length = 195

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/62 (88%), Positives = 59/62 (95%)
 Frame = -3

Query: 283 VYRLRMLGDYHHSTRIAFVEFVMAESAIAALNCSGAVLGCLPIRVSPSKTPVRPRAPRSN 104
           V+RLR+LGDYHHSTRIAFVEFVMAESAIAALNCSGA+LG LPIRVSPSKTPVRPRAPR  
Sbjct: 134 VHRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGAILGSLPIRVSPSKTPVRPRAPRPA 193

Query: 103 MH 98
           +H
Sbjct: 194 LH 195


>dbj|BAD33090.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
          Length = 201

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/62 (88%), Positives = 57/62 (91%)
 Frame = -3

Query: 283 VYRLRMLGDYHHSTRIAFVEFVMAESAIAALNCSGAVLGCLPIRVSPSKTPVRPRAPRSN 104
           VYRLR+LGDYHHSTRIAFVEFVMAESA AALNCSG +LG LPIRVSPSKTPVRPRAPR  
Sbjct: 140 VYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQL 199

Query: 103 MH 98
           MH
Sbjct: 200 MH 201



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/53 (56%), Positives = 34/53 (64%)
 Frame = -3

Query: 271 RMLGDYHHSTRIAFVEFVMAESAIAALNCSGAVLGCLPIRVSPSKTPVRPRAP 113
           RM GD +   R AF+EF   ESA AALN SG VLG  P+RV PSKT + P  P
Sbjct: 46  RMCGDPNSVLRFAFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNP 98


>dbj|BAD33089.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
           gi|182375457|dbj|BAG24017.1| RNA-binding protein [Oryza
           sativa Japonica Group] gi|215736921|dbj|BAG95850.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222639804|gb|EEE67936.1| hypothetical protein
           OsJ_25822 [Oryza sativa Japonica Group]
          Length = 302

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/62 (88%), Positives = 57/62 (91%)
 Frame = -3

Query: 283 VYRLRMLGDYHHSTRIAFVEFVMAESAIAALNCSGAVLGCLPIRVSPSKTPVRPRAPRSN 104
           VYRLR+LGDYHHSTRIAFVEFVMAESA AALNCSG +LG LPIRVSPSKTPVRPRAPR  
Sbjct: 241 VYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQL 300

Query: 103 MH 98
           MH
Sbjct: 301 MH 302



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/53 (56%), Positives = 34/53 (64%)
 Frame = -3

Query: 271 RMLGDYHHSTRIAFVEFVMAESAIAALNCSGAVLGCLPIRVSPSKTPVRPRAP 113
           RM GD +   R AF+EF   ESA AALN SG VLG  P+RV PSKT + P  P
Sbjct: 147 RMCGDPNSVLRFAFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNP 199


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