BLASTX nr result

ID: Atractylodes21_contig00031025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031025
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533746.1| ubiquitin fusion degradaton protein, putativ...   312   3e-83
ref|XP_002299862.1| predicted protein [Populus trichocarpa] gi|2...   311   8e-83
gb|ABK94471.1| unknown [Populus trichocarpa]                          311   8e-83
ref|XP_003547271.1| PREDICTED: ubiquitin fusion degradation prot...   306   2e-81
ref|XP_002513003.1| ubiquitin fusion degradaton protein, putativ...   299   2e-79

>ref|XP_002533746.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
           gi|223526334|gb|EEF28633.1| ubiquitin fusion degradaton
           protein, putative [Ricinus communis]
          Length = 315

 Score =  312 bits (800), Expect = 3e-83
 Identities = 149/172 (86%), Positives = 163/172 (94%)
 Frame = +3

Query: 117 SMFEQNYRCYPVSFIEKSHLEKGDKIIMPPSALDRLAYLQIDYPMLFELRNPSASKVSHC 296
           SMFE++YRCYP SFI+K HLEKGDKIIMPPSALD+LA L IDYPMLFELRNPSA +V+HC
Sbjct: 9   SMFERSYRCYPGSFIDKPHLEKGDKIIMPPSALDQLASLHIDYPMLFELRNPSAERVTHC 68

Query: 297 GVLEFVADEGLIYIPYWMMENMLLQEGDIVNVKNASLSKGTYVKLQPHTMDFLDISNPKA 476
           GVLEFVADEGLI++PYWMMENMLLQEGD+V +KNASL KGTYVKLQPHT DFLDISNPKA
Sbjct: 69  GVLEFVADEGLIFLPYWMMENMLLQEGDLVQLKNASLMKGTYVKLQPHTTDFLDISNPKA 128

Query: 477 ILETALRSYSCLTTGDTIMVAYNNKKFYIDIVETKPSAAISIIETDCEVDFA 632
           ILET+LR+YSCLTTGDTIMVAYNNKK+YIDIVETKPS A+SIIETDCEVDFA
Sbjct: 129 ILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVETKPSPAVSIIETDCEVDFA 180


>ref|XP_002299862.1| predicted protein [Populus trichocarpa] gi|222847120|gb|EEE84667.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  311 bits (796), Expect = 8e-83
 Identities = 147/172 (85%), Positives = 161/172 (93%)
 Frame = +3

Query: 117 SMFEQNYRCYPVSFIEKSHLEKGDKIIMPPSALDRLAYLQIDYPMLFELRNPSASKVSHC 296
           S FEQ+YRCYPVSFI+K+HLEKGDKIIMPPSALDRLA L IDYPMLFEL NPSA + SHC
Sbjct: 4   SSFEQSYRCYPVSFIDKAHLEKGDKIIMPPSALDRLATLHIDYPMLFELHNPSAGRTSHC 63

Query: 297 GVLEFVADEGLIYIPYWMMENMLLQEGDIVNVKNASLSKGTYVKLQPHTMDFLDISNPKA 476
           GVLEF+ADEG+IY+PYWMMENMLLQEGDIV ++N SL KGT+VKLQPHT DFLDISNPKA
Sbjct: 64  GVLEFIADEGMIYLPYWMMENMLLQEGDIVQLRNTSLEKGTFVKLQPHTKDFLDISNPKA 123

Query: 477 ILETALRSYSCLTTGDTIMVAYNNKKFYIDIVETKPSAAISIIETDCEVDFA 632
           ILET+LR+YSCLTTGDTIMVAYNNKK+YIDIVE KPS+AISIIETDCEVDFA
Sbjct: 124 ILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVEAKPSSAISIIETDCEVDFA 175


>gb|ABK94471.1| unknown [Populus trichocarpa]
          Length = 314

 Score =  311 bits (796), Expect = 8e-83
 Identities = 147/172 (85%), Positives = 161/172 (93%)
 Frame = +3

Query: 117 SMFEQNYRCYPVSFIEKSHLEKGDKIIMPPSALDRLAYLQIDYPMLFELRNPSASKVSHC 296
           S FEQ+YRCYPVSFI+K+HLEKGDKIIMPPSALDRLA L IDYPMLFEL NPSA + SHC
Sbjct: 9   SSFEQSYRCYPVSFIDKAHLEKGDKIIMPPSALDRLATLHIDYPMLFELHNPSAGRTSHC 68

Query: 297 GVLEFVADEGLIYIPYWMMENMLLQEGDIVNVKNASLSKGTYVKLQPHTMDFLDISNPKA 476
           GVLEF+ADEG+IY+PYWMMENMLLQEGDIV ++N SL KGT+VKLQPHT DFLDISNPKA
Sbjct: 69  GVLEFIADEGMIYLPYWMMENMLLQEGDIVQLRNTSLEKGTFVKLQPHTKDFLDISNPKA 128

Query: 477 ILETALRSYSCLTTGDTIMVAYNNKKFYIDIVETKPSAAISIIETDCEVDFA 632
           ILET+LR+YSCLTTGDTIMVAYNNKK+YIDIVE KPS+AISIIETDCEVDFA
Sbjct: 129 ILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVEAKPSSAISIIETDCEVDFA 180


>ref|XP_003547271.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
           max]
          Length = 318

 Score =  306 bits (785), Expect = 2e-81
 Identities = 149/178 (83%), Positives = 162/178 (91%), Gaps = 1/178 (0%)
 Frame = +3

Query: 102 YRDPP-SMFEQNYRCYPVSFIEKSHLEKGDKIIMPPSALDRLAYLQIDYPMLFELRNPSA 278
           YRD   + FEQ YRCYPVSFIEK  LEKGDKIIMPPSALDRLA L I+YPMLF+++NPSA
Sbjct: 4   YRDDRFATFEQFYRCYPVSFIEKPDLEKGDKIIMPPSALDRLASLHIEYPMLFQIKNPSA 63

Query: 279 SKVSHCGVLEFVADEGLIYIPYWMMENMLLQEGDIVNVKNASLSKGTYVKLQPHTMDFLD 458
            +V+HCGVLEFV+DEG+IYIPYWMMENMLLQEGDIV VKN +L+KGTYVKLQPHT DFLD
Sbjct: 64  ERVTHCGVLEFVSDEGIIYIPYWMMENMLLQEGDIVKVKNTNLAKGTYVKLQPHTKDFLD 123

Query: 459 ISNPKAILETALRSYSCLTTGDTIMVAYNNKKFYIDIVETKPSAAISIIETDCEVDFA 632
           ISNPKAILET LRSYSCLTTGDTIMV YNNKK+YIDIVETKPS A+SIIETDCEVDFA
Sbjct: 124 ISNPKAILETTLRSYSCLTTGDTIMVPYNNKKYYIDIVETKPSPAVSIIETDCEVDFA 181


>ref|XP_002513003.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
           gi|223548014|gb|EEF49506.1| ubiquitin fusion degradaton
           protein, putative [Ricinus communis]
          Length = 356

 Score =  299 bits (766), Expect = 2e-79
 Identities = 142/170 (83%), Positives = 155/170 (91%)
 Frame = +3

Query: 123 FEQNYRCYPVSFIEKSHLEKGDKIIMPPSALDRLAYLQIDYPMLFELRNPSASKVSHCGV 302
           FEQ YRCYP SFIEK  +E GDKIIMPPSALDRLA L IDYPMLFELRN +A ++SHCGV
Sbjct: 48  FEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERISHCGV 107

Query: 303 LEFVADEGLIYIPYWMMENMLLQEGDIVNVKNASLSKGTYVKLQPHTMDFLDISNPKAIL 482
           LEF+A+EG+IY+PYWMMEN+LLQEGDIV VKN +L KGTYVKLQPHT DFLDISNPKAIL
Sbjct: 108 LEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAIL 167

Query: 483 ETALRSYSCLTTGDTIMVAYNNKKFYIDIVETKPSAAISIIETDCEVDFA 632
           ET LR+YSCLTTGD+IMVAYNNKK+YIDIVETKPS AISIIETDCEVDFA
Sbjct: 168 ETTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFA 217


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