BLASTX nr result

ID: Atractylodes21_contig00031015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031015
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33568.3| unnamed protein product [Vitis vinifera]              238   1e-60
ref|XP_002271492.1| PREDICTED: ell-associated factor Eaf isoform...   238   1e-60
ref|XP_002271519.1| PREDICTED: ell-associated factor Eaf isoform...   229   4e-58
ref|NP_565010.1| RNA polymerase II transcription elongation fact...   206   3e-51
gb|ABK95382.1| unknown [Populus trichocarpa]                          205   7e-51

>emb|CBI33568.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  238 bits (607), Expect = 1e-60
 Identities = 130/208 (62%), Positives = 148/208 (71%), Gaps = 8/208 (3%)
 Frame = -1

Query: 683 MANS--NKRDEPLTAPPVDRWFDLTLGSSFQD-NPSSKFCTLRYEFKPASIDKNQPGKLH 513
           MAN   N +DEP TAP  DRW+DLTLGSSF+D + S+KFCTLRYEFKPASIDKNQPG LH
Sbjct: 1   MANKSINNKDEPSTAPESDRWYDLTLGSSFKDPHSSTKFCTLRYEFKPASIDKNQPGSLH 60

Query: 512 KTKDNKVAVEFQNNQPGKPKVSFEGSSEDYKDNDAVLFFDGTRFKLERLHRSVKRLRHVR 333
           K K+N+V VEF NNQPGKPKV+FEGSSEDYK+NDAVLFFDG  F+LERLHR+VKRLRHVR
Sbjct: 61  KNKENRVTVEFHNNQPGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVR 120

Query: 332 QPGESVAAAAVTL----XXXXXXXXXXXXXXXSKLQSSNKSLL-PPSVEVERIEIGNFKG 168
            PGES AAAA T                    +KLQS NKS+  P  VEVERI+IGN + 
Sbjct: 121 LPGESAAAAATTAATTSVVPPVESYSPPIGKGAKLQSFNKSIAHPVPVEVERIDIGNSES 180

Query: 167 YDGKAREEKVVENPSIPSNSFYASPDPK 84
              KA+  KVV+ P    N    SP+ K
Sbjct: 181 LGTKAKNGKVVDYPPSRPNPSVTSPNSK 208


>ref|XP_002271492.1| PREDICTED: ell-associated factor Eaf isoform 1 [Vitis vinifera]
           gi|147820042|emb|CAN62810.1| hypothetical protein
           VITISV_025292 [Vitis vinifera]
          Length = 344

 Score =  238 bits (607), Expect = 1e-60
 Identities = 130/208 (62%), Positives = 148/208 (71%), Gaps = 8/208 (3%)
 Frame = -1

Query: 683 MANS--NKRDEPLTAPPVDRWFDLTLGSSFQD-NPSSKFCTLRYEFKPASIDKNQPGKLH 513
           MAN   N +DEP TAP  DRW+DLTLGSSF+D + S+KFCTLRYEFKPASIDKNQPG LH
Sbjct: 1   MANKSINNKDEPSTAPESDRWYDLTLGSSFKDPHSSTKFCTLRYEFKPASIDKNQPGSLH 60

Query: 512 KTKDNKVAVEFQNNQPGKPKVSFEGSSEDYKDNDAVLFFDGTRFKLERLHRSVKRLRHVR 333
           K K+N+V VEF NNQPGKPKV+FEGSSEDYK+NDAVLFFDG  F+LERLHR+VKRLRHVR
Sbjct: 61  KNKENRVTVEFHNNQPGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVR 120

Query: 332 QPGESVAAAAVTL----XXXXXXXXXXXXXXXSKLQSSNKSLL-PPSVEVERIEIGNFKG 168
            PGES AAAA T                    +KLQS NKS+  P  VEVERI+IGN + 
Sbjct: 121 LPGESAAAAATTAATTSVVPPVESYSPPIGKGAKLQSFNKSIAHPVPVEVERIDIGNSES 180

Query: 167 YDGKAREEKVVENPSIPSNSFYASPDPK 84
              KA+  KVV+ P    N    SP+ K
Sbjct: 181 LGTKAKNGKVVDYPPSRPNPSVTSPNSK 208


>ref|XP_002271519.1| PREDICTED: ell-associated factor Eaf isoform 2 [Vitis vinifera]
          Length = 343

 Score =  229 bits (585), Expect = 4e-58
 Identities = 128/208 (61%), Positives = 146/208 (70%), Gaps = 8/208 (3%)
 Frame = -1

Query: 683 MANS--NKRDEPLTAPPVDRWFDLTLGSSFQD-NPSSKFCTLRYEFKPASIDKNQPGKLH 513
           MAN   N +DEP TAP  DRW+DLTLGSSF+D + S+KFCTLRYEFKPASIDKNQPG LH
Sbjct: 1   MANKSINNKDEPSTAPESDRWYDLTLGSSFKDPHSSTKFCTLRYEFKPASIDKNQPGSLH 60

Query: 512 KTKDNKVAVEFQNNQPGKPKVSFEGSSEDYKDNDAVLFFDGTRFKLERLHRSVKRLRHVR 333
           K K+N+V VEF NNQPGKPKV+FEGSSEDYK+NDAVLFFDG  F+LERLHR+VKRLRHVR
Sbjct: 61  KNKENRVTVEFHNNQPGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVR 120

Query: 332 QPGESVAAAAVTL----XXXXXXXXXXXXXXXSKLQSSNKSLL-PPSVEVERIEIGNFKG 168
            PGES AAAA T                    +KLQS NKS+  P  VEVERI+IGN + 
Sbjct: 121 LPGESAAAAATTAATTSVVPPVESYSPPIGKGAKLQSFNKSIAHPVPVEVERIDIGNSES 180

Query: 167 YDGKAREEKVVENPSIPSNSFYASPDPK 84
             G   +  VV+ P    N    SP+ K
Sbjct: 181 L-GIRNKNVVVDYPPSRPNPSVTSPNSK 207


>ref|NP_565010.1| RNA polymerase II transcription elongation factor [Arabidopsis
           thaliana] gi|12323437|gb|AAG51700.1|AC016972_19 unknown
           protein; 36401-34743 [Arabidopsis thaliana]
           gi|16974550|gb|AAL31191.1| At1g71080/F23N20_7
           [Arabidopsis thaliana] gi|22137124|gb|AAM91407.1|
           At1g71080/F23N20_7 [Arabidopsis thaliana]
           gi|332197038|gb|AEE35159.1| RNA polymerase II
           transcription elongation factor [Arabidopsis thaliana]
          Length = 326

 Score =  206 bits (525), Expect = 3e-51
 Identities = 105/167 (62%), Positives = 127/167 (76%), Gaps = 1/167 (0%)
 Frame = -1

Query: 677 NSNKRDEPLTAPPVDRWFDLTLGSSFQDNPSSKFCTLRYEFKPASIDKNQPGKLHKTKDN 498
           +++ RDEP TAP  D+W+DL LGSS +D+ S KFCTLRYEFKPASIDKN+ G +HK KDN
Sbjct: 2   SNHSRDEPSTAPKTDQWYDLVLGSSAKDDSSHKFCTLRYEFKPASIDKNRSGSMHKKKDN 61

Query: 497 KVAVEFQNNQPGKPKVSFEGSSEDYKDNDAVLFFDGTRFKLERLHRSVKRLRHVRQPGES 318
           +V+VEFQNNQPGKPKV+FEGSSEDYK++DAVLFFDG +F+LERLHR+V +LRHVR PGES
Sbjct: 62  RVSVEFQNNQPGKPKVTFEGSSEDYKESDAVLFFDGEKFRLERLHRAVTQLRHVRTPGES 121

Query: 317 VAAAAVTLXXXXXXXXXXXXXXXSKLQSSNKSLLPP-SVEVERIEIG 180
            AA+   +               +K    N+SLLP   VEVERIEIG
Sbjct: 122 AAASQSAV---PVEHRLSPVGRAAKSPQVNRSLLPDVPVEVERIEIG 165


>gb|ABK95382.1| unknown [Populus trichocarpa]
          Length = 317

 Score =  205 bits (522), Expect = 7e-51
 Identities = 111/202 (54%), Positives = 137/202 (67%), Gaps = 2/202 (0%)
 Frame = -1

Query: 683 MANSNKRDEPLTAPPVDRWFDLTLGSSFQDNPSSKFCTLRYEFKPASIDKNQPGKLHKTK 504
           MAN N ++EP +AP  DRW++L LG SF++  S+KFCTLRYEFKPASIDK +PG  HK K
Sbjct: 1   MAN-NSKEEPKSAPQPDRWYNLALGPSFKEQSSNKFCTLRYEFKPASIDKTKPGLFHKNK 59

Query: 503 DNKVAVEFQNNQPGKPKVSFEGSSEDYKDNDAVLFFDGTRFKLERLHRSVKRLRHVRQPG 324
           DN+V+VEFQNNQ GK K +FEGSSEDYK+NDAVLFFDG  F+LERLHRSVK+LRH+R PG
Sbjct: 60  DNRVSVEFQNNQLGKSKFTFEGSSEDYKENDAVLFFDGQTFRLERLHRSVKQLRHLRLPG 119

Query: 323 ESVAAA-AVTLXXXXXXXXXXXXXXXSKLQSSNKSLLPP-SVEVERIEIGNFKGYDGKAR 150
           ES AAA A ++               +K     +S  P   VEVERI++G       KA 
Sbjct: 120 ESAAAASAQSMLAVEAPGLSPPVGKGAKPVQIGRSAFPTVPVEVERIDVGEPHVLGTKAA 179

Query: 149 EEKVVENPSIPSNSFYASPDPK 84
            E + E+P+   N   +SP PK
Sbjct: 180 NEGITEHPTHVPNVSTSSPSPK 201


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