BLASTX nr result

ID: Atractylodes21_contig00030993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030993
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275015.1| PREDICTED: ATP synthase gamma chain, chlorop...   254   4e-74
ref|XP_004134761.1| PREDICTED: ATP synthase gamma chain, chlorop...   255   2e-73
ref|XP_002518477.1| ATP synthase gamma chain 2, chloroplast, put...   251   6e-73
ref|XP_002525795.1| ATP synthase gamma chain 2, chloroplast, put...   248   2e-72
ref|XP_002305572.1| predicted protein [Populus trichocarpa] gi|1...   252   2e-72

>ref|XP_002275015.1| PREDICTED: ATP synthase gamma chain, chloroplastic-like isoform 1
           [Vitis vinifera]
          Length = 372

 Score =  254 bits (648), Expect(2) = 4e-74
 Identities = 124/159 (77%), Positives = 146/159 (91%)
 Frame = -2

Query: 479 ITEAMKLVAAAKVRRAQEAVVNGRPFSESLIDVLYSINQQLQLEDIDTPLTAIRPIKKVA 300
           ITEAMKLVAAAKVRRAQEAVVNGRPFSE+L++VLY+IN+QLQ +DID PLT +RP+KKVA
Sbjct: 68  ITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDIDVPLTKVRPVKKVA 127

Query: 299 LVVVTGDRGLCGGFNNIILRKSQTRIAEFKNLGLDYTVISVGKQGNSYFLKRPNLLVERF 120
           LVVVTGDRGLCGGFNN I++K+++RIAE K+LGLDYTVISVGK+GNSYFL+RP + V++F
Sbjct: 128 LVVVTGDRGLCGGFNNAIIKKAESRIAELKDLGLDYTVISVGKKGNSYFLRRPYIPVDKF 187

Query: 119 IESEGFPTAKHSQVIADDVFSLFVSEEVDKVEILYTKFV 3
           +E    PTAK +Q IADDVFSLFVSEEVDKVE+LYTKFV
Sbjct: 188 LEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFV 226



 Score = 51.2 bits (121), Expect(2) = 4e-74
 Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
 Frame = -1

Query: 753 MSQLNLSSWVSSDHRFQSNHTLVQHHSRS-FQ--------SNVSRPTITCNLRELRNRIA 601
           MS  NL+ WVSS      +  L    S + FQ        ++ S+  I C LRELR RI 
Sbjct: 1   MSCSNLTMWVSSKPSLSDSSLLSFRSSLNPFQLPSHNSPTASPSKSVIQCGLRELRERID 60

Query: 600 SVKSTQKITEAMKL 559
           SVK+TQKITEAMKL
Sbjct: 61  SVKNTQKITEAMKL 74


>ref|XP_004134761.1| PREDICTED: ATP synthase gamma chain, chloroplastic-like [Cucumis
           sativus] gi|449479457|ref|XP_004155604.1| PREDICTED: ATP
           synthase gamma chain, chloroplastic-like [Cucumis
           sativus]
          Length = 371

 Score =  255 bits (651), Expect(2) = 2e-73
 Identities = 123/159 (77%), Positives = 145/159 (91%)
 Frame = -2

Query: 479 ITEAMKLVAAAKVRRAQEAVVNGRPFSESLIDVLYSINQQLQLEDIDTPLTAIRPIKKVA 300
           ITEAMKLVAAAKVRRAQEAVVNGRPFSESL++VLY+IN+QLQ EDID PLT +RP+KKVA
Sbjct: 67  ITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVPLTKVRPVKKVA 126

Query: 299 LVVVTGDRGLCGGFNNIILRKSQTRIAEFKNLGLDYTVISVGKQGNSYFLKRPNLLVERF 120
           L+VVTGDRGLCGGFNN+I++K+++RIAE K LGLDYT+ISVGK+GNSYF +RP + V+RF
Sbjct: 127 LIVVTGDRGLCGGFNNMIIKKAESRIAELKTLGLDYTIISVGKKGNSYFFRRPYIPVDRF 186

Query: 119 IESEGFPTAKHSQVIADDVFSLFVSEEVDKVEILYTKFV 3
           +E    PTAK +Q IADDVFSLF+SEEVDKVE+LYTKFV
Sbjct: 187 LEGGSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFV 225



 Score = 48.1 bits (113), Expect(2) = 2e-73
 Identities = 33/74 (44%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
 Frame = -1

Query: 753 MSQLNLSSWVSSDHRFQSNHTL---------VQHHSRSFQSNVSRPTITCNLRELRNRIA 601
           M+   L+ WVSS      +  L         V  H  + +S+   P I C LRELR RI 
Sbjct: 1   MACSKLAMWVSSKPSSSDSSALSFRPVNPFRVPSHGSASRSSSVTP-IQCGLRELRERID 59

Query: 600 SVKSTQKITEAMKL 559
           SVK+TQKITEAMKL
Sbjct: 60  SVKNTQKITEAMKL 73


>ref|XP_002518477.1| ATP synthase gamma chain 2, chloroplast, putative [Ricinus
           communis] gi|223542322|gb|EEF43864.1| ATP synthase gamma
           chain 2, chloroplast, putative [Ricinus communis]
          Length = 376

 Score =  251 bits (641), Expect(2) = 6e-73
 Identities = 123/159 (77%), Positives = 145/159 (91%)
 Frame = -2

Query: 479 ITEAMKLVAAAKVRRAQEAVVNGRPFSESLIDVLYSINQQLQLEDIDTPLTAIRPIKKVA 300
           ITEAMKLVAAAKVRRAQEAVVNGRPFSE+L++VLY+IN+QLQ EDID PLT  RP+KKVA
Sbjct: 72  ITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTEDIDVPLTKNRPVKKVA 131

Query: 299 LVVVTGDRGLCGGFNNIILRKSQTRIAEFKNLGLDYTVISVGKQGNSYFLKRPNLLVERF 120
           LVVVTGDRGLCGGFNN I++K+++RIAE K+LG+DYT+ISVGK+GNSYF++RP + V+RF
Sbjct: 132 LVVVTGDRGLCGGFNNNIIKKAESRIAELKDLGVDYTIISVGKKGNSYFIRRPYIPVDRF 191

Query: 119 IESEGFPTAKHSQVIADDVFSLFVSEEVDKVEILYTKFV 3
           +E    PTAK +Q IADDVFSLFVSEEVDKVE+LYTKFV
Sbjct: 192 LEGTNLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFV 230



 Score = 50.1 bits (118), Expect(2) = 6e-73
 Identities = 35/78 (44%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
 Frame = -1

Query: 753 MSQLNLSSWVSSDHRFQSNHTL----------VQHHSRSFQS---NVSRPTITCNLRELR 613
           MS  NL+ WVSS        +L          +  HS    S   + S   I CNLR+LR
Sbjct: 1   MSCSNLTMWVSSKPSLSDTSSLSFCSSLNPFQLPTHSSGSNSPSRSSSATPIHCNLRDLR 60

Query: 612 NRIASVKSTQKITEAMKL 559
            RI SVK+TQKITEAMKL
Sbjct: 61  TRIDSVKNTQKITEAMKL 78


>ref|XP_002525795.1| ATP synthase gamma chain 2, chloroplast, putative [Ricinus
           communis] gi|223534945|gb|EEF36631.1| ATP synthase gamma
           chain 2, chloroplast, putative [Ricinus communis]
          Length = 381

 Score =  248 bits (633), Expect(2) = 2e-72
 Identities = 119/159 (74%), Positives = 145/159 (91%)
 Frame = -2

Query: 479 ITEAMKLVAAAKVRRAQEAVVNGRPFSESLIDVLYSINQQLQLEDIDTPLTAIRPIKKVA 300
           ITEAMKLVAAAK+RRAQEAV+NGRPF+ESL++VLY IN+QLQLEDID PLT +RP+K+VA
Sbjct: 74  ITEAMKLVAAAKIRRAQEAVINGRPFAESLLEVLYHINEQLQLEDIDVPLTNVRPVKRVA 133

Query: 299 LVVVTGDRGLCGGFNNIILRKSQTRIAEFKNLGLDYTVISVGKQGNSYFLKRPNLLVERF 120
           LVVVTGDRGLCGGFNN +LRK++TR+ E +N+GLD +VISVGK+GN+YF +R N  V++F
Sbjct: 134 LVVVTGDRGLCGGFNNAVLRKAETRMMELENMGLDCSVISVGKKGNAYFKRRGNACVDKF 193

Query: 119 IESEGFPTAKHSQVIADDVFSLFVSEEVDKVEILYTKFV 3
           IE + FPTAK +Q+IADDVFSLFVSEEVDKVE++YTKFV
Sbjct: 194 IEGDSFPTAKEAQLIADDVFSLFVSEEVDKVELMYTKFV 232



 Score = 51.2 bits (121), Expect(2) = 2e-72
 Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 15/80 (18%)
 Frame = -1

Query: 753 MSQLNLSSWV----------SSDHRFQSNH----TLVQHHSRSFQSNVSRPT-ITCNLRE 619
           MS  NL+ WV          S   RFQ+N       + H   +F  + S  + I C LRE
Sbjct: 1   MSSSNLTMWVNPKPSKFETSSLSFRFQANPFRHLARISHLYNTFSQSYSYSSPIHCGLRE 60

Query: 618 LRNRIASVKSTQKITEAMKL 559
           LR RI++VK+TQKITEAMKL
Sbjct: 61  LRERISTVKNTQKITEAMKL 80


>ref|XP_002305572.1| predicted protein [Populus trichocarpa] gi|118489494|gb|ABK96549.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222848536|gb|EEE86083.1| predicted protein [Populus
           trichocarpa]
          Length = 375

 Score =  252 bits (643), Expect(2) = 2e-72
 Identities = 120/159 (75%), Positives = 145/159 (91%)
 Frame = -2

Query: 479 ITEAMKLVAAAKVRRAQEAVVNGRPFSESLIDVLYSINQQLQLEDIDTPLTAIRPIKKVA 300
           ITEAMKLVAAAKVRRAQEAVVNGRPFSE+L++VLY+IN+QLQ +D+D PLT +RP+KKVA
Sbjct: 71  ITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVDAPLTKVRPVKKVA 130

Query: 299 LVVVTGDRGLCGGFNNIILRKSQTRIAEFKNLGLDYTVISVGKQGNSYFLKRPNLLVERF 120
           LVVVTGDRGLCGGFNN +++K++ RIA+ K LG+DYT+ISVGK+GN+YFL+RP + V+RF
Sbjct: 131 LVVVTGDRGLCGGFNNYLIKKAEARIADLKQLGIDYTIISVGKKGNTYFLRRPYIPVDRF 190

Query: 119 IESEGFPTAKHSQVIADDVFSLFVSEEVDKVEILYTKFV 3
           +E  G PTAK +Q IADDVFSLFVSEEVDKVE+LYTKFV
Sbjct: 191 LEKGGLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFV 229



 Score = 47.4 bits (111), Expect(2) = 2e-72
 Identities = 37/77 (48%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
 Frame = -1

Query: 753 MSQLNLSSWVSSDHR--------FQSNHTLVQHHSRSFQSNVSRPT----ITCNLRELRN 610
           MS  NL+  VSS           F+S+    Q  S    +N SR T    I C LRELR 
Sbjct: 1   MSCSNLTMLVSSKPSLSDTTSLSFRSSLNPFQLPSSPAANNPSRSTSVTPIHCGLRELRT 60

Query: 609 RIASVKSTQKITEAMKL 559
           RI SVK+TQKITEAMKL
Sbjct: 61  RIQSVKNTQKITEAMKL 77


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