BLASTX nr result

ID: Atractylodes21_contig00030976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030976
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC68435.1| putative small GTP-binding protein [Tragopogon du...    97   1e-18
gb|ABC68436.1| putative small GTP-binding protein [Tragopogon pr...    96   2e-18
ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [...    91   1e-16
ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [...    90   2e-16
ref|XP_002303077.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16

>gb|ABC68435.1| putative small GTP-binding protein [Tragopogon dubius]
          Length = 104

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/65 (80%), Positives = 52/65 (80%)
 Frame = +3

Query: 9   SL*NSXXXXXXXXXXXXYLFKIVVIGDSAVGKSNLLSRFARDEFDLHSKATIGVEFQTQV 188
           SL NS            YLFKIVVIGDSAVGKSNLLSRFARDEFDLHSKATIGVEFQTQV
Sbjct: 1   SLYNSGKKMEEGVGGEEYLFKIVVIGDSAVGKSNLLSRFARDEFDLHSKATIGVEFQTQV 60

Query: 189 VDIDG 203
           VDIDG
Sbjct: 61  VDIDG 65


>gb|ABC68436.1| putative small GTP-binding protein [Tragopogon pratensis]
           gi|290796656|gb|ADD64893.1| Rab GTPase-like protein
           [Tragopogon porrifolius] gi|291481006|gb|ADE06482.1|
           putative small GTP-binding protein [Tragopogon
           porrifolius]
          Length = 105

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/48 (100%), Positives = 48/48 (100%)
 Frame = +3

Query: 60  YLFKIVVIGDSAVGKSNLLSRFARDEFDLHSKATIGVEFQTQVVDIDG 203
           YLFKIVVIGDSAVGKSNLLSRFARDEFDLHSKATIGVEFQTQVVDIDG
Sbjct: 19  YLFKIVVIGDSAVGKSNLLSRFARDEFDLHSKATIGVEFQTQVVDIDG 66


>ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
           gi|147834571|emb|CAN69655.1| hypothetical protein
           VITISV_000615 [Vitis vinifera]
           gi|296080913|emb|CBI18743.3| unnamed protein product
           [Vitis vinifera]
          Length = 215

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/48 (91%), Positives = 47/48 (97%)
 Frame = +3

Query: 60  YLFKIVVIGDSAVGKSNLLSRFARDEFDLHSKATIGVEFQTQVVDIDG 203
           YLFKIV+IGDSAVGKSNLLSR+AR+EFDLHSKATIGVEFQTQ VDIDG
Sbjct: 8   YLFKIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDG 55


>ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
           gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related
           protein RABA5d-like [Cucumis sativus]
          Length = 217

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/48 (89%), Positives = 48/48 (100%)
 Frame = +3

Query: 60  YLFKIVVIGDSAVGKSNLLSRFARDEFDLHSKATIGVEFQTQVVDIDG 203
           YLFKIV+IGDSAVGKSNLLSR+AR+EF+LHSKATIGVEFQTQV+DIDG
Sbjct: 12  YLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDG 59


>ref|XP_002303077.1| predicted protein [Populus trichocarpa] gi|222844803|gb|EEE82350.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/48 (93%), Positives = 47/48 (97%)
 Frame = +3

Query: 60  YLFKIVVIGDSAVGKSNLLSRFARDEFDLHSKATIGVEFQTQVVDIDG 203
           YLFKIVVIGDSAVGKSNLLSRFAR+EFD +SKATIGVEFQTQVVDIDG
Sbjct: 14  YLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDG 61


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