BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030957
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28722.3| unnamed protein product [Vitis vinifera]               67   3e-09
ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|NP_171809.1| pentatricopeptide repeat-containing protein [Ar...    59   1e-06

>emb|CBI28722.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
 Frame = +3

Query: 369 MVLVRKLRYGNSKVL-YAVQGIFSCSNLIAVRVPRCQITRYSCGSMAFHRSVVSSMCNLT 545
           M+ +RKL+   + +  Y++     CS+     +P C+I  +S     F + +   + NL 
Sbjct: 578 MLSIRKLKSHITPLSPYSLLSSLLCSDH---SIPICRIRGFS-RDRPFFQFISPYLTNLN 633

Query: 546 ----VLPGNIYPWQSFSTMAASTILVQARDPAKLSEELQNALDEHRLDDAWNLHEQH 704
               VL       QSFS+M   TILVQARDPAKL EEL+NA+D HR  DAW L EQH
Sbjct: 634 MGNAVLDSRSGSIQSFSSMGG-TILVQARDPAKLCEELENAIDGHRYSDAWKLFEQH 689


>ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Vitis vinifera]
          Length = 784

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
 Frame = +3

Query: 369 MVLVRKLRYGNSKVL-YAVQGIFSCSNLIAVRVPRCQITRYSCGSMAFHRSVVSSMCNLT 545
           M+ +RKL+   + +  Y++     CS+     +P C+I  +S     F + +   + NL 
Sbjct: 1   MLSIRKLKSHITPLSPYSLLSSLLCSDH---SIPICRIRGFS-RDRPFFQFISPYLTNLN 56

Query: 546 ----VLPGNIYPWQSFSTMAASTILVQARDPAKLSEELQNALDEHRLDDAWNLHEQH 704
               VL       QSFS+M   TILVQARDPAKL EEL+NA+D HR  DAW L EQH
Sbjct: 57  MGNAVLDSRSGSIQSFSSMGG-TILVQARDPAKLCEELENAIDGHRYSDAWKLFEQH 112


>ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|222856234|gb|EEE93781.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = +3

Query: 576 SFSTMAASTILVQARDPAKLSEELQNALDEHRLDDAWNLHEQH 704
           SFST+A  TILVQARDPAKL  E++NA+DEHR +DAW L EQH
Sbjct: 40  SFSTLAG-TILVQARDPAKLCMEIENAIDEHRFNDAWKLFEQH 81


>ref|NP_171809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75200246|sp|Q9SA60.1|PPR6_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g03100, mitochondrial; Flags: Precursor
           gi|4587568|gb|AAD25799.1|AC006550_7 Contains PF|00637
           Clathrin 7-fold repeat. EST gb|AA721862 comes from this
           gene [Arabidopsis thaliana] gi|44917465|gb|AAS49057.1|
           At1g03100 [Arabidopsis thaliana]
           gi|332189408|gb|AEE27529.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 793

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/49 (57%), Positives = 40/49 (81%)
 Frame = +3

Query: 558 NIYPWQSFSTMAASTILVQARDPAKLSEELQNALDEHRLDDAWNLHEQH 704
           +I+  ++ S+++ S IL+QARDPAKL+EE+Q A+DEHR D+AW L EQH
Sbjct: 74  SIHRREAISSISGS-ILLQARDPAKLNEEIQIAVDEHRCDEAWRLFEQH 121