BLASTX nr result

ID: Atractylodes21_contig00030938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030938
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    60   4e-07

>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 450

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 8/181 (4%)
 Frame = +2

Query: 92  LSSDFLGPCRTPTTPWDFPALTSLYLSFITLCDENSEKCVDLFSKCVNLKNLTLEKFIVE 271
           +++DF  P  +    + F  LT+L+L+   LC   ++ C+D F+ CV+LKNL        
Sbjct: 227 VAADFSNPFASLAELFGFTTLTTLHLNNFILCYTGTD-CLDPFANCVHLKNL-------- 277

Query: 272 AVEVFDIISPQLSNLTLKGGRCSKIINLIAPKLENLTVIDCSIKC--LNAPPGLSSLCYR 445
                      LS ++ K     K   + APKL NL ++    KC  + A P LS+  Y 
Sbjct: 278 ----------HLSEMSFKSDLNPKDFVISAPKLSNLNLMCNRFKCKIVVAAPQLSNFIYL 327

Query: 446 GYATP-QFSNDRFHSLNKATVCLY-----IHRPKLPYKEEDARKTINMLQQLHSARFLTL 607
            Y+TP  F   R  S++   + ++     + + +   KEE     INMLQ  H+A  + L
Sbjct: 328 -YSTPCAFFEFRLPSMDGLVIDIHEPHDRLEKCRRRKKEETLHGLINMLQGHHNAEAVKL 386

Query: 608 N 610
           +
Sbjct: 387 S 387


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