BLASTX nr result

ID: Atractylodes21_contig00030906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030906
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
emb|CBI29756.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...   129   2e-28
ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...   129   3e-28
ref|XP_002892610.1| DNA helicase [Arabidopsis lyrata subsp. lyra...   100   9e-20

>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
           predicted protein [Populus trichocarpa]
          Length = 1194

 Score =  132 bits (331), Expect = 4e-29
 Identities = 73/157 (46%), Positives = 92/157 (58%)
 Frame = -2

Query: 472 EAAGHLQIMKDMLISISNDLLDNVGELNSDQIEXXXXXXXXXXXXXXXXXXXLHSTLMDK 293
           EAA HLQ MKDMLI++SNDLLDN  EL+  QI+                       L D+
Sbjct: 288 EAAKHLQEMKDMLIAVSNDLLDNAAELSQAQIDKLRQDRLQLNKQIQQL----EKYLRDE 343

Query: 292 ERQISTFSAYTTTRALQYGTPPTFTSMVNPVRLDDQFYTSNKTNGHNRWDSSSVSCFSEG 113
           ERQ S FSA T  R LQY TP +    ++P+R D Q +  N  NG+ +W++ SVS  S  
Sbjct: 344 ERQKSHFSASTLVRNLQYETPQSAACKIDPMRFDAQVHLRNDLNGYEKWNAPSVSFSSID 403

Query: 112 NFGGFSTPMEREPYIRKYVEVNYTEGSDDKTWSKRDF 2
           +FG  S P+EREPYI  +VEVNY EGS+D  WS  +F
Sbjct: 404 SFGVSSVPLEREPYIPSFVEVNYIEGSNDPKWSSTNF 440


>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score =  129 bits (325), Expect = 2e-28
 Identities = 73/157 (46%), Positives = 93/157 (59%)
 Frame = -2

Query: 472 EAAGHLQIMKDMLISISNDLLDNVGELNSDQIEXXXXXXXXXXXXXXXXXXXLHSTLMDK 293
           EAA HLQ +KDMLI ISN+LLDNV +L S Q+E                   LHS  +D+
Sbjct: 265 EAANHLQELKDMLIVISNELLDNV-DLTSVQVEKLRQDRLYLNKQIQQLEIHLHSVSVDE 323

Query: 292 ERQISTFSAYTTTRALQYGTPPTFTSMVNPVRLDDQFYTSNKTNGHNRWDSSSVSCFSEG 113
           ER+ S FSA TTT   Q+ TPP     ++P+R D Q +  N+   + +W++SSVS  S  
Sbjct: 324 ERKNSNFSASTTTPWAQFQTPPATAVGIDPMRFDAQVHLRNEPGNYEKWNTSSVSFSSID 383

Query: 112 NFGGFSTPMEREPYIRKYVEVNYTEGSDDKTWSKRDF 2
            FG    P+EREPYI K +EVNY EGS DK WS  +F
Sbjct: 384 RFGVTPYPLEREPYIPKLIEVNYIEGSSDKKWSSGNF 420


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
           vinifera]
          Length = 1224

 Score =  129 bits (325), Expect = 2e-28
 Identities = 73/157 (46%), Positives = 93/157 (59%)
 Frame = -2

Query: 472 EAAGHLQIMKDMLISISNDLLDNVGELNSDQIEXXXXXXXXXXXXXXXXXXXLHSTLMDK 293
           EAA HLQ +KDMLI ISN+LLDNV +L S Q+E                   LHS  +D+
Sbjct: 254 EAANHLQELKDMLIVISNELLDNV-DLTSVQVEKLRQDRLYLNKQIQQLEIHLHSVSVDE 312

Query: 292 ERQISTFSAYTTTRALQYGTPPTFTSMVNPVRLDDQFYTSNKTNGHNRWDSSSVSCFSEG 113
           ER+ S FSA TTT   Q+ TPP     ++P+R D Q +  N+   + +W++SSVS  S  
Sbjct: 313 ERKNSNFSASTTTPWAQFQTPPATAVGIDPMRFDAQVHLRNEPGNYEKWNTSSVSFSSID 372

Query: 112 NFGGFSTPMEREPYIRKYVEVNYTEGSDDKTWSKRDF 2
            FG    P+EREPYI K +EVNY EGS DK WS  +F
Sbjct: 373 RFGVTPYPLEREPYIPKLIEVNYIEGSSDKKWSSGNF 409


>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 1233

 Score =  129 bits (323), Expect = 3e-28
 Identities = 72/157 (45%), Positives = 91/157 (57%)
 Frame = -2

Query: 472 EAAGHLQIMKDMLISISNDLLDNVGELNSDQIEXXXXXXXXXXXXXXXXXXXLHSTLMDK 293
           EA  HLQ MKDMLI++SN+LLDN   L+S QIE                     S L DK
Sbjct: 289 EAGNHLQEMKDMLIAVSNELLDNSTNLSSVQIEKLRQDRLQLNKQIQQL----ESYLRDK 344

Query: 292 ERQISTFSAYTTTRALQYGTPPTFTSMVNPVRLDDQFYTSNKTNGHNRWDSSSVSCFSEG 113
           ERQ S FSA T  +  QY TP    + ++P+R D Q Y  N++ G+  W++ S+S  S  
Sbjct: 345 ERQKSHFSASTANQNFQYETPQCAANKIDPMRFDAQVYLRNESGGYESWNTPSISFSSVD 404

Query: 112 NFGGFSTPMEREPYIRKYVEVNYTEGSDDKTWSKRDF 2
            FG  S P+EREPYI K+VEVNY EGS+D  WS  +F
Sbjct: 405 RFGISSGPIEREPYIPKFVEVNYIEGSNDPKWSSTNF 441


>ref|XP_002892610.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
           gi|297338452|gb|EFH68869.1| DNA helicase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1189

 Score =  100 bits (250), Expect = 9e-20
 Identities = 56/158 (35%), Positives = 90/158 (56%), Gaps = 1/158 (0%)
 Frame = -2

Query: 472 EAAGHLQIMKDMLISISNDLLDNVGELNSDQIEXXXXXXXXXXXXXXXXXXXLHSTLMDK 293
           EA+ H++ MKD+L++ISN+LLD+  +L+  ++E                     + + DK
Sbjct: 280 EASTHVEQMKDVLLAISNELLDDAADLSPYRVEQLRQERLQLKKQIQQL----ENHIRDK 335

Query: 292 ERQISTFSAYTTTRALQYGTPPTFTSMVNPVRLDDQFYTSNKTN-GHNRWDSSSVSCFSE 116
           ERQ S FS+ T TR  QY TP +    ++  + D + + S++     + W++   S FS 
Sbjct: 336 ERQKSQFSSSTATRTFQYETPKSTNYKMDQPQTDFRAHLSDQGRYAGDSWNTPRDSSFSV 395

Query: 115 GNFGGFSTPMEREPYIRKYVEVNYTEGSDDKTWSKRDF 2
             +G  + P+EREPY+ K ++V YTEGS+DK WS R+F
Sbjct: 396 DRYGLSTAPVEREPYVPKIIDVTYTEGSNDKKWSSREF 433


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