BLASTX nr result

ID: Atractylodes21_contig00030903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030903
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus...   123   1e-26
ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi...   114   6e-24
ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
ref|XP_002886062.1| hypothetical protein ARALYDRAFT_899980 [Arab...   113   1e-23
ref|NP_179256.3| proteinaceous RNase P 2 [Arabidopsis thaliana] ...   112   2e-23

>ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223531469|gb|EEF33301.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 561

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/104 (52%), Positives = 78/104 (75%)
 Frame = -2

Query: 403 AIKQLEVVVDLLYDRNKKWPLDILNDRRILALKDNPSNKGLLEKWTERGFLYGTPTGSDS 224
           +I QL+ VV  LYDR+ KWPL +L+++R+ A+ +NPS + L+++WTE+  LY TP GS+ 
Sbjct: 339 SISQLDAVVKELYDRSGKWPLIVLHNKRVRAILENPSQRNLIQEWTEKDILYTTPHGSND 398

Query: 223 DWYWIYAFLKLKCLIVTNDQMRDHMSKLPNGDRLLPLLKERHQI 92
           DWYW+YA +KLKCL+VTND+MRDH+ +L  G       KERHQ+
Sbjct: 399 DWYWLYAAVKLKCLLVTNDEMRDHIFEL-LGSSFFLKWKERHQV 441


>ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/131 (44%), Positives = 87/131 (66%), Gaps = 5/131 (3%)
 Frame = -2

Query: 400 IKQLEVVVDLLYDRN-KKWPLDILNDRRILALKDNPSNKGLLEKWTERGFLYGTPTGSDS 224
           I QL+ VV  LY+R+ KKWPL +L+++R+  L +NPS++ L+E+W + G LY TP GS+ 
Sbjct: 337 ISQLDDVVKELYNRSGKKWPLVVLHNKRLRGLMENPSSRRLVEEWMKNGVLYTTPNGSND 396

Query: 223 DWYWIYAFLKLKCLIVTNDQMRDHMSKLPNGDRLLPLLKERHQI----LDKGLSLEEPEI 56
           DWYW++A +KL+CL+VTND+MRDH+ +L  G       KERHQ+    +   L L+ P  
Sbjct: 397 DWYWLFAAVKLRCLLVTNDEMRDHIFEL-IGSNFFNQWKERHQVHYTFVKGNLKLQMPPS 455

Query: 55  AALLKVREKSG 23
            +L+    + G
Sbjct: 456 YSLVIQESEKG 466


>ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 530

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/132 (43%), Positives = 87/132 (65%), Gaps = 5/132 (3%)
 Frame = -2

Query: 403 AIKQLEVVVDLLYDRN-KKWPLDILNDRRILALKDNPSNKGLLEKWTERGFLYGTPTGSD 227
           +I QL+ VV  LY+R+ KKWPL +L+++R+  L +NPS++ L+E+W   G LY TP GS+
Sbjct: 337 SISQLDDVVKELYNRSGKKWPLVVLHNKRLRGLMENPSSRRLVEEWMNNGALYTTPNGSN 396

Query: 226 SDWYWIYAFLKLKCLIVTNDQMRDHMSKLPNGDRLLPLLKERHQI----LDKGLSLEEPE 59
            DWYW++A +KL+CL+VTND+MRDH+ +L  G       KERHQ+    +   L L+ P 
Sbjct: 397 DDWYWLFAAVKLRCLLVTNDEMRDHIFEL-IGSNFFNQWKERHQVHYTFVKGNLKLQMPP 455

Query: 58  IAALLKVREKSG 23
             +L+    + G
Sbjct: 456 SYSLVIQESEKG 467


>ref|XP_002886062.1| hypothetical protein ARALYDRAFT_899980 [Arabidopsis lyrata subsp.
           lyrata] gi|297331902|gb|EFH62321.1| hypothetical protein
           ARALYDRAFT_899980 [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/118 (50%), Positives = 77/118 (65%), Gaps = 6/118 (5%)
 Frame = -2

Query: 397 KQLEVVVDLLYDR--NKKWPLDILNDRRILALKDNPSNKGLLEKWTERGFLYGTPTGSDS 224
           +QLE VV  LY    N KWPL +L+ RR+ AL +NP+++ L+E+W   G LY TP GS+ 
Sbjct: 363 QQLESVVKELYRESGNNKWPLILLHKRRVRALLENPTHRNLVEEWISNGVLYPTPPGSND 422

Query: 223 DWYWIYAFLKLKCLIVTNDQMRDHMSKLPNGDRLLPLLKERHQI----LDKGLSLEEP 62
           DWYW+YA  KLKCL+VTND+MRDH+ +L  G       KERHQ+    +   L LE P
Sbjct: 423 DWYWLYAAAKLKCLLVTNDEMRDHIFEL-LGSSFFHKWKERHQVRYTFVKGNLKLEMP 479


>ref|NP_179256.3| proteinaceous RNase P 2 [Arabidopsis thaliana]
           gi|75116712|sp|Q680B9.1|PRRP2_ARATH RecName:
           Full=Proteinaceous RNase P 2 gi|51970038|dbj|BAD43711.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|330251428|gb|AEC06522.1| proteinaceous RNase P 2
           [Arabidopsis thaliana]
          Length = 528

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/120 (47%), Positives = 77/120 (64%), Gaps = 6/120 (5%)
 Frame = -2

Query: 403 AIKQLEVVVDLLYDR--NKKWPLDILNDRRILALKDNPSNKGLLEKWTERGFLYGTPTGS 230
           ++ QLE V+  LY    N KWPL +L+ RR+  L +NP+++ L+E+W   G LY TP GS
Sbjct: 360 SLSQLESVMKELYRESGNNKWPLILLHKRRVKTLLENPTHRNLVEEWISNGVLYATPPGS 419

Query: 229 DSDWYWIYAFLKLKCLIVTNDQMRDHMSKLPNGDRLLPLLKERHQI----LDKGLSLEEP 62
           + DWYW+YA  KLKCL+VTND+MRDH+ +L  G       KERHQ+    +   L LE P
Sbjct: 420 NDDWYWLYAAAKLKCLLVTNDEMRDHIFEL-LGSTFFQKWKERHQVRYTFVKGNLKLEMP 478


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