BLASTX nr result

ID: Atractylodes21_contig00030890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030890
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272059.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...    59   5e-07
emb|CBI33105.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002272059.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Vitis vinifera]
          Length = 893

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
 Frame = +3

Query: 51  DDDLSS-DSFT-REQNPDADFPSDSIPDVIALNHR----EACSSSQDATVLRRPDTIQFL 212
           DDD S   SF  R+ + +A    +S PD     HR     +C SS  A   R    +QF 
Sbjct: 33  DDDFSDLVSFRMRKFDQNAFVSCNSPPDSHLERHRVVDARSCPSSCSAESARPDSRLQFF 92

Query: 213 VLIPSEGKTLVLQGKPEDKVHSVHEKIQSLTGIAVAEQR 329
           V + SEG TLV+    +D V S+H +IQS+TGI V EQR
Sbjct: 93  VRMISEGNTLVIHANSDDTVESLHHRIQSITGIPVMEQR 131


>emb|CBI33105.3| unnamed protein product [Vitis vinifera]
          Length = 831

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
 Frame = +3

Query: 81  REQNPDADFPSDSIPDVIALNHR----EACSSSQDATVLRRPDTIQFLVLIPSEGKTLVL 248
           R+ + +A    +S PD     HR     +C SS  A   R    +QF V + SEG TLV+
Sbjct: 2   RKFDQNAFVSCNSPPDSHLERHRVVDARSCPSSCSAESARPDSRLQFFVRMISEGNTLVI 61

Query: 249 QGKPEDKVHSVHEKIQSLTGIAVAEQR 329
               +D V S+H +IQS+TGI V EQR
Sbjct: 62  HANSDDTVESLHHRIQSITGIPVMEQR 88


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