BLASTX nr result

ID: Atractylodes21_contig00030879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030879
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285859.1| PREDICTED: uncharacterized protein LOC100267...    96   4e-18
ref|XP_002307436.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002300986.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_002890465.1| hypothetical protein ARALYDRAFT_472418 [Arab...    81   1e-13
ref|NP_564152.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain ...    79   3e-13

>ref|XP_002285859.1| PREDICTED: uncharacterized protein LOC100267707 [Vitis vinifera]
          Length = 274

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 41/65 (63%), Positives = 54/65 (83%)
 Frame = +1

Query: 43  KKNAPGAFIFFMATLVMWTVSVFFEILFNKRTEIYPLLAGFCFYQFANWICRSFISRDPL 222
           +  APGAF  F+ATL++W +SV FEI+FNKR E+  ++ GFCFYQFANW+ RS++S+DPL
Sbjct: 8   QNKAPGAF--FLATLLLWMISVLFEIVFNKRRELLSVVGGFCFYQFANWVIRSWVSKDPL 65

Query: 223 LVNTC 237
           LVNTC
Sbjct: 66  LVNTC 70


>ref|XP_002307436.1| predicted protein [Populus trichocarpa] gi|222856885|gb|EEE94432.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/64 (62%), Positives = 49/64 (76%)
 Frame = +1

Query: 43  KKNAPGAFIFFMATLVMWTVSVFFEILFNKRTEIYPLLAGFCFYQFANWICRSFISRDPL 222
           +KN  GAF  F+ATL++W VSV FEI FNKRTE+  ++AG C +Q ANW  RSF+SRDPL
Sbjct: 11  EKNKVGAF--FLATLILWFVSVLFEIFFNKRTELLWIVAGACLFQIANWAIRSFVSRDPL 68

Query: 223 LVNT 234
            VNT
Sbjct: 69  FVNT 72


>ref|XP_002300986.1| predicted protein [Populus trichocarpa] gi|222842712|gb|EEE80259.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/64 (60%), Positives = 50/64 (78%)
 Frame = +1

Query: 43  KKNAPGAFIFFMATLVMWTVSVFFEILFNKRTEIYPLLAGFCFYQFANWICRSFISRDPL 222
           +KN  G F  F+ATL++W VSV FEI+FNKR+E+  ++AG  F+Q ANW+ RSFISRDPL
Sbjct: 11  EKNKAGTF--FLATLILWFVSVLFEIIFNKRSELLWIVAGAVFFQIANWVVRSFISRDPL 68

Query: 223 LVNT 234
            VNT
Sbjct: 69  FVNT 72


>ref|XP_002890465.1| hypothetical protein ARALYDRAFT_472418 [Arabidopsis lyrata subsp.
           lyrata] gi|297336307|gb|EFH66724.1| hypothetical protein
           ARALYDRAFT_472418 [Arabidopsis lyrata subsp. lyrata]
          Length = 288

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/75 (53%), Positives = 52/75 (69%)
 Frame = +1

Query: 10  IAMAGHQHRLQKKNAPGAFIFFMATLVMWTVSVFFEILFNKRTEIYPLLAGFCFYQFANW 189
           +A  G  + + KKN  G F  F+ATL++W VSV FEI FN RTE+  ++ G CF+Q  NW
Sbjct: 1   MARNGIGNTVVKKNGAGEF--FLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNW 58

Query: 190 ICRSFISRDPLLVNT 234
           + RS+ISRDPL VNT
Sbjct: 59  VVRSWISRDPLFVNT 73


>ref|NP_564152.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
           [Arabidopsis thaliana]
           gi|5263332|gb|AAD41434.1|AC007727_23 F8K7.23
           [Arabidopsis thaliana]
           gi|6552728|gb|AAF16527.1|AC013482_1 T26F17.1
           [Arabidopsis thaliana] gi|17380914|gb|AAL36269.1|
           unknown protein [Arabidopsis thaliana]
           gi|20258983|gb|AAM14207.1| unknown protein [Arabidopsis
           thaliana] gi|21593249|gb|AAM65198.1| unknown
           [Arabidopsis thaliana] gi|332192036|gb|AEE30157.1| TRAM,
           LAG1 and CLN8 (TLC) lipid-sensing domain containing
           protein [Arabidopsis thaliana]
          Length = 288

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/64 (57%), Positives = 47/64 (73%)
 Frame = +1

Query: 43  KKNAPGAFIFFMATLVMWTVSVFFEILFNKRTEIYPLLAGFCFYQFANWICRSFISRDPL 222
           KKN  G F  F+ATL++W VSV FEI FN RTE+  ++ G CF+Q  NW+ RS+ISRDP+
Sbjct: 12  KKNGAGQF--FLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVVRSWISRDPI 69

Query: 223 LVNT 234
            VNT
Sbjct: 70  FVNT 73


Top