BLASTX nr result

ID: Atractylodes21_contig00030868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030868
         (1698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875363.1| hypothetical protein ARALYDRAFT_904940 [Arab...    87   2e-14
ref|NP_175421.2| F-box protein [Arabidopsis thaliana] gi|7517743...    66   2e-08
ref|XP_002872649.1| hypothetical protein ARALYDRAFT_911615 [Arab...    64   2e-07
ref|XP_002877123.1| hypothetical protein ARALYDRAFT_905141 [Arab...    62   5e-07
ref|XP_002862830.1| hypothetical protein ARALYDRAFT_920231 [Arab...    60   2e-06

>ref|XP_002875363.1| hypothetical protein ARALYDRAFT_904940 [Arabidopsis lyrata subsp.
            lyrata] gi|297321201|gb|EFH51622.1| hypothetical protein
            ARALYDRAFT_904940 [Arabidopsis lyrata subsp. lyrata]
          Length = 435

 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 72/248 (29%), Positives = 116/248 (46%), Gaps = 14/248 (5%)
 Frame = -2

Query: 1052 VCDPVTRHWVTLPRGRDKSANRHPIFFGEGFVSRVNQDNVLTSYTVVRVELLNTLSTHLN 873
            V +PV R WV + R    S   +      G  +RV+++ V+  Y VV V      +T+L 
Sbjct: 132  VGNPVLREWVKI-RPCTLSLKSYFQTIKFGLATRVDENGVVLGYKVVLVNTRFENATNLT 190

Query: 872  LETFSSETGKWVDYRLPCPNPIAL-LKRGGGPICYNGILHWF----VYDYGMVAFDPHKD 708
            L+ +SSETG+W    + CP PI         PI  NG+LHWF    +   G++A D +  
Sbjct: 191  LQIYSSETGEWTCENVCCPCPIPWDSSPYPEPISVNGVLHWFGHGTINAGGIIAIDLYNT 250

Query: 707  ----PKSCRLIQFPQDR----DGESEYKHDGLYRLCDDCQGRLRFFEVAPEASAFYCFSM 552
                   C  I FP +     DG+  YK     R C   +G + +  +  E+       +
Sbjct: 251  SPLRENHCWFIPFPNENLFVVDGKKSYK-IWCRRACTTSEGFIMYINMVSESK----MKV 305

Query: 551  WDM-KDYEKGEWCSEFKVTRSDLSSSDPELGHWLMKATFLPLSFHPFNLDIVYLRCAELA 375
            W + K+Y + E    +++      SS+ +L H       +P+  HPF+ ++VYL   E +
Sbjct: 306  WRLNKNYYEIESREYWQL------SSEIDLAHVDYGIGSIPIVMHPFDRNVVYLWSVEKS 359

Query: 374  CVVSYNIQ 351
            C+VS N++
Sbjct: 360  CLVSINMR 367


>ref|NP_175421.2| F-box protein [Arabidopsis thaliana]
            gi|75177431|sp|Q9LPM2.1|FB51_ARATH RecName: Full=F-box
            protein At1g49990 gi|8569100|gb|AAF76445.1|AC015445_12
            Contains Ribosomal S17 PF|00366 and DLH PF|01738 domains
            [Arabidopsis thaliana] gi|52354165|gb|AAU44403.1|
            hypothetical protein AT1G49990 [Arabidopsis thaliana]
            gi|332194383|gb|AEE32504.1| F-box protein [Arabidopsis
            thaliana]
          Length = 430

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 95/383 (24%), Positives = 152/383 (39%), Gaps = 40/383 (10%)
 Frame = -2

Query: 1379 QSIFRFKCVCKHWLSLISQPSFCRFYFSRMLTANAASSSIPFRILYRYIYVSKF------ 1218
            +SI RFK VCK W S+I        YF R+  +   SSS  + I++R  Y+ +       
Sbjct: 21   RSIARFKSVCKRWKSVIESD-----YFRRLFGSFHRSSSTSWSIMFRTEYLREMTQAIGF 75

Query: 1217 ---------KDVLDRFRP-QIYXXXXXXXXXXXXXXXXXXSDQFKVLGVSNXXXXXXXXX 1068
                     K ++    P Q Y                       V  + N         
Sbjct: 76   HGCKTWDLPKSLVSYIMPFQEYPNLPTSEYYYIASSNGLIWIDVLVSRIKNKVYSYKSF- 134

Query: 1067 XXXXYVCDPVTRHWVTLPRGRDKSA-NRHPIF----FGEGFVSRVNQDNVLTSYTVVR-- 909
                 V +PV + WV +P+  +    ++HP +     G G V+RV ++ V++S+ +VR  
Sbjct: 135  -----VGNPVLQEWVEIPQPPNPWVQDKHPWYPSPYSGVGMVTRV-ENGVVSSFKMVRTV 188

Query: 908  -VELLNTLSTHLNLE---TFSSETGKWVDYRLPCPNPIALLKRGG---GPICYNGILH-W 753
             +EL++     + L     +SSETG W   ++    P+     GG    P+  NG+L+ W
Sbjct: 189  QMELIDRRDEGMYLWRVCVYSSETGLWTFKQVFSSRPV----HGGRVDSPVNLNGVLYMW 244

Query: 752  FVYDYG-----MVAFDPHKDPKSCRLIQFPQDRDGESEYKHDGLY---RLCDDCQGR-LR 600
              Y +      +VA D +     C++I  P   D E E++HD  +   R C    G  + 
Sbjct: 245  DRYMFSNGPGVLVAHDFYGADDQCQVIPLPGAND-EHEHEHDDEHEHVRRCLTTSGEDVI 303

Query: 599  FFEVAPEASAFYCFSMWDMKDYEKGEWCSEFKVTRSDLSSSDPELGHWLMKATFLPLSFH 420
            F EV            W + + E   W   ++V      S               PL+ +
Sbjct: 304  FIEVIHRI-----LKAWRLHNKESERWQLIWEVVMPSFISD----------VNCFPLAMN 348

Query: 419  PFNLDIVYLRCAELACVVSYNIQ 351
            PF+  IVYL   +  C+VS  +Q
Sbjct: 349  PFDTYIVYLWDRQHGCLVSGYLQ 371


>ref|XP_002872649.1| hypothetical protein ARALYDRAFT_911615 [Arabidopsis lyrata subsp.
            lyrata] gi|297318486|gb|EFH48908.1| hypothetical protein
            ARALYDRAFT_911615 [Arabidopsis lyrata subsp. lyrata]
          Length = 436

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 21/261 (8%)
 Frame = -2

Query: 1052 VCDPVTRHWVTLPRGRDKSA--------NRHPIFFGEGFVSRVNQDNVLTSYTVVRVELL 897
            V +P+ R WV +P     SA        NRH  F   G V+++ +  ++  Y VV +   
Sbjct: 130  VGNPLLRQWVRIPLPPHLSAFDVVRLQENRH--FSDNGLVTKMEK-GIVVGYKVVWMLAS 186

Query: 896  NTLSTHLNLETFSSETGKWVDYRLPCPNPIALLKRGGGPICYNGILHWFVY-------DY 738
               S  L    +SSETG W+  ++ C   + L  R G  +  NGILHW          DY
Sbjct: 187  YPASKELTFMIYSSETGLWITKKVRCLRAL-LWSRLGYSVPLNGILHWLAASGCSLDADY 245

Query: 737  GMVAFDPHK---DPKSCRLIQFPQDRDGESEYKHDGLYRLCDDCQGRLRFFEVAPEASAF 567
             +V++D +K   D   C +I FP  +  E   ++    R      G + +  V  ++   
Sbjct: 246  -VVSYDFYKGCDDDLDCNIIPFPGIQRFE---RNQRFKRTITTSAGSVVYCNVFNDSGG- 300

Query: 566  YCFSMWDM---KDYEKGEWCSEFKVTRSDLSSSDPELGHWLMKATFLPLSFHPFNLDIVY 396
                +W +   KD+ K  W   +K     L+++   +G     A + P+  HP N DI+Y
Sbjct: 301  RTIRVWRLVSTKDHPKS-WKLSWK-----LNTNSSLIG---FGADYFPVVMHPLNSDIIY 351

Query: 395  LRCAELACVVSYNIQHKRLDL 333
            L       +V  N++  +  L
Sbjct: 352  LWSRNKNSLVLLNLRTHKFSL 372


>ref|XP_002877123.1| hypothetical protein ARALYDRAFT_905141 [Arabidopsis lyrata subsp.
            lyrata] gi|297322961|gb|EFH53382.1| hypothetical protein
            ARALYDRAFT_905141 [Arabidopsis lyrata subsp. lyrata]
          Length = 407

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 8/228 (3%)
 Frame = -2

Query: 1052 VCDPVTRHWVTLPRGRDKSANRHPIFFGEGFVSRVNQDNVLTSYTVVRVEL----LNTLS 885
            V DPV R W+ +PR    S+       G   V+ +N  +VL  Y VVR  +    +    
Sbjct: 122  VADPVLREWIKIPRHPPYSSQDD--LQGAAIVTHMNNGDVL-GYKVVRFGVSILGIGMKR 178

Query: 884  THLNLETFSSETGKWVDYRLPCPNPIALLKRGGGPICYNGILHWFVYDYGMV-AFDPHKD 708
              L  + +SS+ G W  + +    PI+ L     P+  NG LHW      ++ A D +  
Sbjct: 179  DRLCFQIYSSDLGNWTYHHVSTQRPISKL-LPSNPLNLNGYLHWLCRATQVIFAHDFYAP 237

Query: 707  PKSCRLIQFPQDRDGESEYKHDGL---YRLCDDCQGRLRFFEVAPEASAFYCFSMWDMKD 537
             + CR+I  PQ R  +  +K  G      L   C G L +              +W +K+
Sbjct: 238  TELCRVIDLPQ-RSAKGYFKQPGQGDEATLTISC-GSLMYMN-TDTGRPNQQLKIWRLKN 294

Query: 536  YEKGEWCSEFKVTRSDLSSSDPELGHWLMKATFLPLSFHPFNLDIVYL 393
            Y  G     +++  +     D  +G        +P++ HPF+ ++VYL
Sbjct: 295  YISGSSKESWELLWTLRPGLDLSVG-------CVPVAMHPFDKEVVYL 335


>ref|XP_002862830.1| hypothetical protein ARALYDRAFT_920231 [Arabidopsis lyrata subsp.
            lyrata] gi|297308572|gb|EFH39088.1| hypothetical protein
            ARALYDRAFT_920231 [Arabidopsis lyrata subsp. lyrata]
          Length = 361

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 77/335 (22%), Positives = 122/335 (36%), Gaps = 6/335 (1%)
 Frame = -2

Query: 1379 QSIFRFKCVCKHWLSLISQPSFCRFYFSRMLTANAASSSIPFRILYRYI--YVSKFKDVL 1206
            +S+   K VCK W S +  P F   + S    ++  S       L R +  Y+S F    
Sbjct: 19   RSVTSSKLVCKQWKSTVESPYFRHLFLSHHQNSSRGSLRCAIWGLTRSLGSYLSSF---- 74

Query: 1205 DRFRPQIYXXXXXXXXXXXXXXXXXXSDQFKVLGVSNXXXXXXXXXXXXXY----VCDPV 1038
                                      +++ +VL  +N                  + +P+
Sbjct: 75   ------------------LTKTFETHNEKVRVLAYTNVGLILIGLGSDLKNPTYYMANPI 116

Query: 1037 TRHWVTLPRGRDKSANRHPIFFGEGFVSRVNQDNVLTSYTVVRVELLNTLSTHLNLETFS 858
            ++  V +P    +   +    F  G V+R+ +D VL  Y VV ++  N  +  L+L  +S
Sbjct: 117  SQQCVKIPPRPLRPLGQQEECFRPGLVTRIEKD-VLLGYKVVLMDRTNIRTGVLSLVVYS 175

Query: 857  SETGKWVDYRLPCPNPIALLKRGGGPICYNGILHWFVYDYGMVAFDPHKDPKSCRLIQFP 678
            SETG W  +     +P         PI  NG ++W   D              CR+I FP
Sbjct: 176  SETGLW-SFNTLQSHPQLHYMSCIDPITLNGNIYWIESD-------------QCRVILFP 221

Query: 677  QDRDGESEYKHDGLYRLCDDCQGRLRFFEVAPEASAFYCFSMWDMKDYEKGEWCSEFKVT 498
             D  G+         R C   Q  L +  +  E  A Y   +W +K    GEW       
Sbjct: 222  NDGTGKK------FPRNCTISQDFLIYMNMVYENRA-YKLRVWRLK---SGEW------- 264

Query: 497  RSDLSSSDPELGHWLMKATFLPLSFHPFNLDIVYL 393
               L S  P     +    + PL  +PF+ DI+Y+
Sbjct: 265  --QLVSEIPS----VTSLEYFPLGINPFHGDIMYM 293


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