BLASTX nr result

ID: Atractylodes21_contig00030851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030851
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30150.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   115   4e-24
ref|XP_004143360.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    98   6e-19
ref|XP_003625697.1| RING finger and WD repeat domain-containing ...    92   4e-17
ref|XP_003520658.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    92   6e-17

>emb|CBI30150.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/85 (65%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
 Frame = +3

Query: 6   RQC-RSSGKCPQCKKRCTLKEVRVLYAARLCVVDAELQKQVRSLEAKCASLEQKNSDCCK 182
           +QC RSSGKCPQCK++CTL+ VR LYA+R+  VD +L+K++RSLEAKCASLE+KN+D C 
Sbjct: 143 QQCGRSSGKCPQCKRKCTLRNVRTLYASRVVAVDEDLRKKIRSLEAKCASLEKKNADWCM 202

Query: 183 KEVKAQEREADLHLKVQQLTEKTKY 257
           KE    +READLHL+VQQL E+T Y
Sbjct: 203 KESDWHKREADLHLQVQQLIERTTY 227


>ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera]
          Length = 567

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/82 (67%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
 Frame = +3

Query: 6   RQC-RSSGKCPQCKKRCTLKEVRVLYAARLCVVDAELQKQVRSLEAKCASLEQKNSDCCK 182
           +QC RSSGKCPQCK++CTL+ VR LYA+R+  VD +L+K++RSLEAKCASLE+KN+D C 
Sbjct: 143 QQCGRSSGKCPQCKRKCTLRNVRTLYASRVVAVDEDLRKKIRSLEAKCASLEKKNADWCM 202

Query: 183 KEVKAQEREADLHLKVQQLTEK 248
           KE    +READLHL+VQQL EK
Sbjct: 203 KESDWHKREADLHLQVQQLIEK 224


>ref|XP_004143360.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Cucumis sativus]
           gi|449482586|ref|XP_004156335.1| PREDICTED: E3
           ubiquitin-protein ligase RFWD3-like [Cucumis sativus]
          Length = 617

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 41/85 (48%), Positives = 67/85 (78%)
 Frame = +3

Query: 3   LRQCRSSGKCPQCKKRCTLKEVRVLYAARLCVVDAELQKQVRSLEAKCASLEQKNSDCCK 182
           L+Q +++GKCPQC ++C+ K+VR ++A R+   D E QK+++SLEA CASLE+K ++ CK
Sbjct: 145 LQQRKNAGKCPQCNRKCSTKDVRKIFAPRIVAADGESQKRIKSLEATCASLEKKEANWCK 204

Query: 183 KEVKAQEREADLHLKVQQLTEKTKY 257
           KEV+ ++RE D+  K+++L+E+T Y
Sbjct: 205 KEVEWKKRETDMQSKLRELSERTNY 229


>ref|XP_003625697.1| RING finger and WD repeat domain-containing protein [Medicago
           truncatula] gi|355500712|gb|AES81915.1| RING finger and
           WD repeat domain-containing protein [Medicago
           truncatula]
          Length = 596

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/85 (54%), Positives = 59/85 (69%)
 Frame = +3

Query: 3   LRQCRSSGKCPQCKKRCTLKEVRVLYAARLCVVDAELQKQVRSLEAKCASLEQKNSDCCK 182
           L+Q ++SGKCPQC +RC++K+VR LYA+R+  VD E QK +RSLE KCASLE K+    K
Sbjct: 163 LQQKKNSGKCPQCNRRCSMKDVRKLYASRVVTVDEESQKMIRSLENKCASLESKDGSWRK 222

Query: 183 KEVKAQEREADLHLKVQQLTEKTKY 257
           KE    +REA L   VQ L +K  Y
Sbjct: 223 KEEGWMKREAALLFDVQNLKKKNTY 247


>ref|XP_003520658.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Glycine max]
          Length = 631

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/81 (56%), Positives = 62/81 (76%)
 Frame = +3

Query: 3   LRQCRSSGKCPQCKKRCTLKEVRVLYAARLCVVDAELQKQVRSLEAKCASLEQKNSDCCK 182
           L+  R+S KCPQCK +C+LK+VR LYA+++  V+ E QK++RSLEAKCA+LE K S+  K
Sbjct: 159 LQHRRNSNKCPQCKVKCSLKDVRKLYASQVVAVEEENQKRIRSLEAKCAALESKVSNWHK 218

Query: 183 KEVKAQEREADLHLKVQQLTE 245
           KE   Q+REA L  +VQ+LTE
Sbjct: 219 KETGWQKREAALSFQVQKLTE 239


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