BLASTX nr result

ID: Atractylodes21_contig00030813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030813
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF94034.1| retrotransposon protein, putative, unclassified [...   196   2e-48
emb|CAE04421.2| OSJNBb0040D15.11 [Oryza sativa Japonica Group]        188   4e-46
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   185   4e-45
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   185   4e-45
gb|ABB47537.2| retrotransposon protein, putative, unclassified [...   179   2e-43

>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score =  196 bits (497), Expect = 2e-48
 Identities = 96/148 (64%), Positives = 115/148 (77%), Gaps = 1/148 (0%)
 Frame = -3

Query: 457  GMSECNSAKSPMEPKLDLNKDEEGVPVNATHYRCLIGSLRYLIHTRPDLGYPVGVVSRYM 278
            GM ECNS   P++P+  L+KD EG PV+AT YR +IGSLRYL+HTRPDL Y VGV SR+M
Sbjct: 1154 GMMECNSVSIPIDPRSQLSKDPEGHPVDATEYRRIIGSLRYLLHTRPDLSYAVGVASRFM 1213

Query: 277  ESPRESHLKAVKQILRYVKGTINYGLMYQKG-GDGKITGYSDSSHNGDRNDGKSTSGMAF 101
            E P   H KAVKQILRY+KGT++YGL+Y  G G  KITGY+DS   GD +D +ST GMAF
Sbjct: 1214 ERPTVMHFKAVKQILRYIKGTMDYGLVYAAGTGALKITGYTDSDLAGDLDDRRSTGGMAF 1273

Query: 100  YFSDNLITWCSQKQQTVALSSCEAEFMA 17
            Y + +L+ W SQKQ+TVALSSCEAEFMA
Sbjct: 1274 YINQSLVAWSSQKQKTVALSSCEAEFMA 1301


>emb|CAE04421.2| OSJNBb0040D15.11 [Oryza sativa Japonica Group]
          Length = 346

 Score =  188 bits (477), Expect = 4e-46
 Identities = 95/149 (63%), Positives = 116/149 (77%), Gaps = 2/149 (1%)
 Frame = -3

Query: 457 GMSECNSAKSPMEPKLDLNKDEEGVPVNATHYRCLIGSLRYLIHTRPDLGYPVGVVSRYM 278
           GM +CNS   P+E +  L+KD EG  V+ T YR LIG LRYL+HTRPDL Y VGVVSR+M
Sbjct: 94  GMLDCNSTSIPIEHRSQLHKDAEGSTVDPTEYRRLIGCLRYLLHTRPDLSYAVGVVSRFM 153

Query: 277 ESPRESHLKAVKQILRYVKGTINYGLMYQKGGDG--KITGYSDSSHNGDRNDGKSTSGMA 104
           E P   H KA+KQILRY+KGTIN GLM+  GG+G  +ITG++DS   GD +D +STSGMA
Sbjct: 154 ERPTVMHFKALKQILRYLKGTINCGLMF-SGGNGAVEITGFTDSDLAGDSDDSRSTSGMA 212

Query: 103 FYFSDNLITWCSQKQQTVALSSCEAEFMA 17
           FYF+ +L++W SQKQ+TVALSSCEAEFMA
Sbjct: 213 FYFNGSLVSWSSQKQKTVALSSCEAEFMA 241


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
            gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
            Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  185 bits (469), Expect = 4e-45
 Identities = 90/148 (60%), Positives = 112/148 (75%), Gaps = 1/148 (0%)
 Frame = -3

Query: 457  GMSECNSAKSPMEPKLDLNKDEEGVPVNATHYRCLIGSLRYLIHTRPDLGYPVGVVSRYM 278
            GM  CN    PMEP+  L+KD +G P++AT YR +IG LRYL+HTRPDL Y VGV SR+M
Sbjct: 1172 GMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCLRYLLHTRPDLSYAVGVASRFM 1231

Query: 277  ESPRESHLKAVKQILRYVKGTINYGLMYQKG-GDGKITGYSDSSHNGDRNDGKSTSGMAF 101
            E P   HLKAVK ILRY+KGT++ GL++  G G   ITG++DS   GD +D +ST GMAF
Sbjct: 1232 ERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGMAF 1291

Query: 100  YFSDNLITWCSQKQQTVALSSCEAEFMA 17
            Y + +L++WCSQKQ+TVALSSCEAEFMA
Sbjct: 1292 YVNSSLVSWCSQKQKTVALSSCEAEFMA 1319


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  185 bits (469), Expect = 4e-45
 Identities = 90/148 (60%), Positives = 112/148 (75%), Gaps = 1/148 (0%)
 Frame = -3

Query: 457  GMSECNSAKSPMEPKLDLNKDEEGVPVNATHYRCLIGSLRYLIHTRPDLGYPVGVVSRYM 278
            GM  CN    PMEP+  L+KD +G P++AT YR +IG LRYL+HTRPDL Y VGV SR+M
Sbjct: 1172 GMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCLRYLLHTRPDLSYAVGVASRFM 1231

Query: 277  ESPRESHLKAVKQILRYVKGTINYGLMYQKG-GDGKITGYSDSSHNGDRNDGKSTSGMAF 101
            E P   HLKAVK ILRY+KGT++ GL++  G G   ITG++DS   GD +D +ST GMAF
Sbjct: 1232 ERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGMAF 1291

Query: 100  YFSDNLITWCSQKQQTVALSSCEAEFMA 17
            Y + +L++WCSQKQ+TVALSSCEAEFMA
Sbjct: 1292 YVNSSLVSWCSQKQKTVALSSCEAEFMA 1319


>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1172

 Score =  179 bits (455), Expect = 2e-43
 Identities = 90/148 (60%), Positives = 112/148 (75%), Gaps = 1/148 (0%)
 Frame = -3

Query: 457  GMSECNSAKSPMEPKLDLNKDEEGVPVNATHYRCLIGSLRYLIHTRPDLGYPVGVVSRYM 278
            GM +CNS   P+E +  L+K  EG  V+ T YR +IG LRYL+HT+PDL Y VGVVS++M
Sbjct: 935  GMLDCNSTSIPIEHRSQLHKVAEGSTVDPTEYRRVIGCLRYLLHTQPDLSYAVGVVSKFM 994

Query: 277  ESPRESHLKAVKQILRYVKGTINYGLMYQKGGDG-KITGYSDSSHNGDRNDGKSTSGMAF 101
            E     H KAVKQILRY+KGTIN GLM+  G D  +ITG++DS   GD +D +STSGMAF
Sbjct: 995  EQLTVMHFKAVKQILRYLKGTINCGLMFSGGNDAVEITGFTDSDLAGDSDDRRSTSGMAF 1054

Query: 100  YFSDNLITWCSQKQQTVALSSCEAEFMA 17
            YF+ +L++W SQKQ+TVALSSCEAEFMA
Sbjct: 1055 YFNSSLVSWSSQKQKTVALSSCEAEFMA 1082


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