BLASTX nr result

ID: Atractylodes21_contig00030774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030774
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635698.1| hypothetical protein MTR_001s0023 [Medicago ...    48   5e-09
emb|CAN69639.1| hypothetical protein VITISV_040272 [Vitis vinifera]    48   9e-09
gb|ACY01934.1| hypothetical protein [Beta vulgaris]                    44   1e-07
gb|AAD20430.1| putative Athila retroelement ORF1 protein [Arabid...    40   2e-07
emb|CAN69709.1| hypothetical protein VITISV_018584 [Vitis vinifera]    44   2e-07

>ref|XP_003635698.1| hypothetical protein MTR_001s0023 [Medicago truncatula]
           gi|355525253|gb|AET05647.1| hypothetical protein
           MTR_001s0023 [Medicago truncatula]
          Length = 128

 Score = 48.1 bits (113), Expect(2) = 5e-09
 Identities = 22/44 (50%), Positives = 31/44 (70%)
 Frame = +2

Query: 116 PLRKYTFPTFDGRRTSIVSPLIAATNFEIKASVIQMVQQAQFGG 247
           PL+ +  P+ D   +SIV+P I A NFE+K S++Q+VQQ QF G
Sbjct: 44  PLKDFAVPSQDEPHSSIVNPTIQANNFELKPSLLQIVQQNQFSG 87



 Score = 37.4 bits (85), Expect(2) = 5e-09
 Identities = 18/38 (47%), Positives = 26/38 (68%)
 Frame = +1

Query: 256 PKIPIAIYIHSWKICVTFKYNGVSDEAIQLRLFPFSLR 369
           P + +++++   +   T K NGV  EAI+LRLFPFSLR
Sbjct: 93  PNLHLSVFV---QFADTLKCNGVDPEAIRLRLFPFSLR 127


>emb|CAN69639.1| hypothetical protein VITISV_040272 [Vitis vinifera]
          Length = 437

 Score = 47.8 bits (112), Expect(2) = 9e-09
 Identities = 24/41 (58%), Positives = 31/41 (75%)
 Frame = +1

Query: 256 PKIPIAIYIHSWKICVTFKYNGVSDEAIQLRLFPFSLRGKA 378
           P + IA ++   +IC TFK+NGV D+AI+LRLFPFSL  KA
Sbjct: 270 PNLHIANFL---EICDTFKHNGVIDDAIRLRLFPFSLNNKA 307



 Score = 36.6 bits (83), Expect(2) = 9e-09
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = +2

Query: 47  KNR*TQESLNYGDDER-DPPLQRVPLRKYTFPTFDGRRTSIVSPLIAATNFEIKASVIQM 223
           K +  QE    GD+   D  +    L+ Y+ P       SI  P I A NFEIK ++IQM
Sbjct: 198 KQQVIQEVPAMGDENHGDNGVPNRALKDYSIPNVGV--LSIQRPPIQANNFEIKLAIIQM 255

Query: 224 VQQA-QFGGFA 253
           ++ + QFGG A
Sbjct: 256 IRSSVQFGGLA 266


>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
          Length = 1717

 Score = 43.9 bits (102), Expect(3) = 1e-07
 Identities = 22/42 (52%), Positives = 26/42 (61%)
 Frame = +2

Query: 122 RKYTFPTFDGRRTSIVSPLIAATNFEIKASVIQMVQQAQFGG 247
           R Y  P+ D   T +  P IAATNFEIK+ V+ MVQ  QF G
Sbjct: 10  RDYAQPSPDNVPTGVPMPTIAATNFEIKSHVLNMVQNNQFAG 51



 Score = 28.9 bits (63), Expect(3) = 1e-07
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +1

Query: 298 CVTFKYNGVSDEAIQLRLFPFSLRGKA 378
           C T K  GV+ + ++L LF FSLR KA
Sbjct: 68  CATQKQAGVTPDEMKLLLFGFSLRDKA 94



 Score = 26.9 bits (58), Expect(3) = 1e-07
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 246 GLPTEDPHSHLHSFME 293
           GLP+EDP+ HL  F++
Sbjct: 51  GLPSEDPNQHLQRFLQ 66


>gb|AAD20430.1| putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
          Length = 622

 Score = 40.0 bits (92), Expect(3) = 2e-07
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +2

Query: 101 PLQRVPLRKYTFPTFDGRRTSIVSPLIAATNFEIKASVIQMVQQAQFGGFA 253
           P    P+  +  P   G R  I +P +   NFEIK+S+I MVQ ++F G +
Sbjct: 26  PSAHQPIGAFDEPNIRGNRNGIQAPPVENNNFEIKSSLINMVQTSKFHGLS 76



 Score = 38.5 bits (88), Expect(3) = 2e-07
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +1

Query: 295 ICVTFKYNGVSDEAIQLRLFPFSLRGKA 378
           +C T K NG+S++A +LRLFPFSL  +A
Sbjct: 90  LCSTVKINGISEDAFKLRLFPFSLGDRA 117



 Score = 20.8 bits (42), Expect(3) = 2e-07
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 246 GLPTEDPHSHLHSFMENLC 302
           GL  EDP  HL  F + LC
Sbjct: 74  GLSMEDPLDHLEQF-DMLC 91


>emb|CAN69709.1| hypothetical protein VITISV_018584 [Vitis vinifera]
          Length = 363

 Score = 43.5 bits (101), Expect(2) = 2e-07
 Identities = 22/41 (53%), Positives = 30/41 (73%)
 Frame = +1

Query: 256 PKIPIAIYIHSWKICVTFKYNGVSDEAIQLRLFPFSLRGKA 378
           P + IA ++   +I  TFK+NGV+D+AI+LRLFPF L  KA
Sbjct: 202 PNLHIANFL---EIFYTFKHNGVTDDAIRLRLFPFPLNNKA 239



 Score = 36.6 bits (83), Expect(2) = 2e-07
 Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
 Frame = +2

Query: 158 TSIVSPLIAATNFEIKASVIQMVQQA-QFGGFA 253
           +SI  P I A NFEIK ++IQM+Q + QFGG A
Sbjct: 166 SSIRRPPIQANNFEIKLAIIQMIQSSIQFGGLA 198


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