BLASTX nr result

ID: Atractylodes21_contig00030758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030758
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533105.1| cold-inducible RNA binding protein, putative...   125   3e-27
ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protei...   125   4e-27
ref|XP_002299889.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protei...   121   7e-26
ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp....   119   2e-25

>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
           gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
           protein, putative [Ricinus communis]
          Length = 94

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/87 (68%), Positives = 75/87 (86%)
 Frame = +2

Query: 83  LGTQLFVSRLSFYTTHKDLKRLFSPFGAITEARLVVDPRTQRPKGFGFVTFESDVDAQNA 262
           LG+QLFV RLS YTT++ L++LFSPFG + EARLV+DPRTQ+PKGFGFVTF+S+  AQ A
Sbjct: 5   LGSQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQAQKA 64

Query: 263 LKALNGKIVDGGLIFVQVAKTKTPGED 343
           LKA+NG+IVDG L+FV+VAK+   GED
Sbjct: 65  LKAMNGRIVDGRLLFVEVAKSINSGED 91


>ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|297746123|emb|CBI16179.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/91 (63%), Positives = 76/91 (83%)
 Frame = +2

Query: 77  RLLGTQLFVSRLSFYTTHKDLKRLFSPFGAITEARLVVDPRTQRPKGFGFVTFESDVDAQ 256
           R   +++FV+RLS YTT+++L  +FSPFG +T+ARL+ DP+TQRPKGFGFV FES+VDA+
Sbjct: 21  RRFSSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDAE 80

Query: 257 NALKALNGKIVDGGLIFVQVAKTKTPGEDQT 349
            ALKA+NG+IV G LIFV++AKT  PGED T
Sbjct: 81  KALKAMNGRIVRGRLIFVEIAKTTRPGEDAT 111


>ref|XP_002299889.1| predicted protein [Populus trichocarpa] gi|222847147|gb|EEE84694.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/85 (72%), Positives = 75/85 (88%)
 Frame = +2

Query: 68  MAKRLLGTQLFVSRLSFYTTHKDLKRLFSPFGAITEARLVVDPRTQRPKGFGFVTFESDV 247
           MA+R+ G QLFVSRLS YTT+ +LKRLFSPFGA++EARLVV+ +T RPKGFGFVTFES+ 
Sbjct: 1   MAQRI-GLQLFVSRLSSYTTNHELKRLFSPFGAVSEARLVVESKTLRPKGFGFVTFESEA 59

Query: 248 DAQNALKALNGKIVDGGLIFVQVAK 322
           DA  ALKA+NG+IV+G LIFV+VAK
Sbjct: 60  DAHKALKAMNGRIVNGRLIFVEVAK 84


>ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
           sativus]
          Length = 95

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/94 (64%), Positives = 78/94 (82%)
 Frame = +2

Query: 68  MAKRLLGTQLFVSRLSFYTTHKDLKRLFSPFGAITEARLVVDPRTQRPKGFGFVTFESDV 247
           MA RL G++LF+SRLS YTT + LK LFSPFG+I+EARL+ DP+T+RPKGFGFVTF+S  
Sbjct: 1   MANRL-GSELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPA 59

Query: 248 DAQNALKALNGKIVDGGLIFVQVAKTKTPGEDQT 349
           +A+ ALKA++G+IVDG LIFV+ AKT+  G D T
Sbjct: 60  EAKKALKAMDGRIVDGRLIFVEFAKTEKHGVDPT 93


>ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310490|gb|EFH40914.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score =  119 bits (299), Expect = 2e-25
 Identities = 62/85 (72%), Positives = 72/85 (84%)
 Frame = +2

Query: 68  MAKRLLGTQLFVSRLSFYTTHKDLKRLFSPFGAITEARLVVDPRTQRPKGFGFVTFESDV 247
           MAKR   TQLFVSRLS YTT + L++LF+PFG I EARL+ D +TQRPKGFGF+TFES+ 
Sbjct: 1   MAKRFT-TQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESED 59

Query: 248 DAQNALKALNGKIVDGGLIFVQVAK 322
           DAQNALKALNGKIV+G LIFV+ AK
Sbjct: 60  DAQNALKALNGKIVNGRLIFVEAAK 84


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