BLASTX nr result

ID: Atractylodes21_contig00030752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030752
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610434.1| tRNA wybutosine-synthesizing protein 2/3/4 [...    67   1e-09
ref|XP_004155603.1| PREDICTED: tRNA wybutosine-synthesizing prot...    67   2e-09
ref|XP_004134760.1| PREDICTED: LOW QUALITY PROTEIN: tRNA wybutos...    67   2e-09
ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing prot...    65   4e-09
ref|XP_003529632.1| PREDICTED: tRNA wybutosine-synthesizing prot...    64   2e-08

>ref|XP_003610434.1| tRNA wybutosine-synthesizing protein 2/3/4 [Medicago truncatula]
           gi|355511489|gb|AES92631.1| tRNA wybutosine-synthesizing
           protein 2/3/4 [Medicago truncatula]
          Length = 1046

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 24/126 (19%)
 Frame = +3

Query: 6   LNSIGEDLFVRSTTSXXXXXXXXXXXXASCYAFGTKFSEPMRINLLPLVSSAEICDETKD 185
           LNS+G+DLFVRST +            ASCYAFGTKFSEP +++LL  + S +     K+
Sbjct: 529 LNSVGKDLFVRSTANVVGDDLVIVGGGASCYAFGTKFSEPAKVSLLHSMHSHDDFMPVKN 588

Query: 186 ETNTRIEKRSNGG------------------------FDLNLEGVYGRQKIIPLRWVLRV 293
           +    I++  NGG                        F+ N+  + G+ + IPL  VL++
Sbjct: 589 QKQHIIDQ--NGGNKVENSQGPQLEHPPNISENESLYFNENVLHINGQSQTIPLHCVLQL 646

Query: 294 DKKHAK 311
           +KK+AK
Sbjct: 647 EKKYAK 652


>ref|XP_004155603.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Cucumis
           sativus]
          Length = 1035

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
 Frame = +3

Query: 6   LNSIGEDLFVRSTTSXXXXXXXXXXXXASCYAFGTKFSEPMRINLLPLVSSAEIC----- 170
           LN  G +LFVRST S            ASCYAFGT FSEPM+I L PL+SS  +      
Sbjct: 526 LNCTGRELFVRSTVSVVGNDLILVGGGASCYAFGTTFSEPMKIRLHPLISSEVVLGHSGN 585

Query: 171 DETKDETNTRIEKRSNG---------GFDLNLEGVYG-RQKIIPLRWVLRVDKKHAK 311
            E  ++ N   +   NG         GF+++ E      QK   L WVL++++K+AK
Sbjct: 586 TEKLEKANRDPKCMPNGNAQSFNEAFGFNIDFEKSNSHEQKQGALYWVLQIERKYAK 642


>ref|XP_004134760.1| PREDICTED: LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing
           protein 2/3/4-like [Cucumis sativus]
          Length = 1034

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
 Frame = +3

Query: 6   LNSIGEDLFVRSTTSXXXXXXXXXXXXASCYAFGTKFSEPMRINLLPLVSSAEIC----- 170
           LN  G +LFVRST S            ASCYAFGT FSEPM+I L PL+SS  +      
Sbjct: 526 LNCTGRELFVRSTVSVVGNDLILVGGGASCYAFGTTFSEPMKIRLHPLISSEVVLGHSGN 585

Query: 171 DETKDETNTRIEKRSNG---------GFDLNLEGVYG-RQKIIPLRWVLRVDKKHAK 311
            E  ++ N   +   NG         GF+++ E      QK   L WVL++++K+AK
Sbjct: 586 TEKLEKANRDPKCMPNGNAQSFNEAFGFNIDFEKSNSHEQKQGALYWVLQIERKYAK 642


>ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Vitis
           vinifera]
          Length = 1018

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
 Frame = +3

Query: 6   LNSIGEDLFVRSTTSXXXXXXXXXXXXASCYAFGTKFSEPMRINLLPLVS------SAEI 167
           L+S+ + LFVRST S            ASCYAFGTKFS PM+INLL LVS       +E+
Sbjct: 522 LDSVFKVLFVRSTASVVGDDLIMIGGGASCYAFGTKFSGPMKINLLQLVSLHDTLVPSEM 581

Query: 168 CDETKDETNTRIEKRSNGGFDLNLEGVYGRQKIIPLRWVLRVDKKHAK 311
            ++        ++++ NG   +++E     ++++ + WVL++++K+AK
Sbjct: 582 EEKHAIHQYEGVKEKKNGDLHVDVE-----KQMVAVYWVLQLERKYAK 624


>ref|XP_003529632.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Glycine
           max]
          Length = 1068

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 26/128 (20%)
 Frame = +3

Query: 6   LNSIGEDLFVRSTTSXXXXXXXXXXXXASCYAFGTKFSEPMRINLLPLVSSAEICDETKD 185
           LNS+G+DLFVRST +            ASCYAFGTKFSEP +++LL L+ S    DE   
Sbjct: 550 LNSVGKDLFVRSTANVVGDDLAIVGGGASCYAFGTKFSEPAKVSLLHLMHSH---DEPVK 606

Query: 186 ETNTRIEKRSNGGFDLNLEGVYGRQ--------------------------KIIPLRWVL 287
               R   ++ G    N+E   G Q                          ++I L +VL
Sbjct: 607 TQRKRTSNQNEGTNRNNIENSCGPQLEHAPNISEDESSHSDDNIPCLNDQSQMIALHYVL 666

Query: 288 RVDKKHAK 311
           +++KK+AK
Sbjct: 667 QLEKKYAK 674


Top