BLASTX nr result

ID: Atractylodes21_contig00030737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030737
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19333.3| unnamed protein product [Vitis vinifera]              162   7e-38
ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g...   162   7e-38
ref|XP_002302373.1| predicted protein [Populus trichocarpa] gi|2...   159   4e-37
ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus ...   151   1e-34
ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g...   138   8e-31

>emb|CBI19333.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score =  162 bits (409), Expect = 7e-38
 Identities = 84/135 (62%), Positives = 96/135 (71%)
 Frame = -3

Query: 664 NFHTPGFPHHMSERSPASAPWGPQRIARGEPGGPLGFPDFAGVPQRRIDRFGGGGHQAVI 485
           + H  G P H+ ER P+SAPWG Q +  G  G P+G  DFAG PQRRI  FGGG  QA+I
Sbjct: 538 SIHRLGIPPHIPERKPSSAPWGHQGLIEG--GVPIGLADFAGGPQRRIPGFGGGNQQAII 595

Query: 484 XXXXXXXXXXXXXXXSIYGEDGGCLKQIREISDAKITITDSRPGAKETLIIISGTPERTH 305
                          SIYGEDGGCL+QIR+ISDAKITIT+ +PGA ET+IIISGTPE+TH
Sbjct: 596 TSTTVEVVVPRSLVPSIYGEDGGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQTH 655

Query: 304 AAQSLIQAFVLVETE 260
           AAQSLIQAFVL ETE
Sbjct: 656 AAQSLIQAFVLSETE 670


>ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 701

 Score =  162 bits (409), Expect = 7e-38
 Identities = 84/135 (62%), Positives = 96/135 (71%)
 Frame = -3

Query: 664 NFHTPGFPHHMSERSPASAPWGPQRIARGEPGGPLGFPDFAGVPQRRIDRFGGGGHQAVI 485
           + H  G P H+ ER P+SAPWG Q +  G  G P+G  DFAG PQRRI  FGGG  QA+I
Sbjct: 567 SIHRLGIPPHIPERKPSSAPWGHQGLIEG--GVPIGLADFAGGPQRRIPGFGGGNQQAII 624

Query: 484 XXXXXXXXXXXXXXXSIYGEDGGCLKQIREISDAKITITDSRPGAKETLIIISGTPERTH 305
                          SIYGEDGGCL+QIR+ISDAKITIT+ +PGA ET+IIISGTPE+TH
Sbjct: 625 TSTTVEVVVPRSLVPSIYGEDGGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQTH 684

Query: 304 AAQSLIQAFVLVETE 260
           AAQSLIQAFVL ETE
Sbjct: 685 AAQSLIQAFVLSETE 699


>ref|XP_002302373.1| predicted protein [Populus trichocarpa] gi|222844099|gb|EEE81646.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  159 bits (403), Expect = 4e-37
 Identities = 82/137 (59%), Positives = 92/137 (67%)
 Frame = -3

Query: 664 NFHTPGFPHHMSERSPASAPWGPQRIARGEPGGPLGFPDFAGVPQRRIDRFGGGGHQAVI 485
           N H PG P H++ER P    WGPQ    G  GGP+G PDFAG PQRRI  FGG  H A+I
Sbjct: 550 NIHRPGMPPHIAERKP----WGPQGFVEG--GGPMGLPDFAGPPQRRISGFGGVSHPAII 603

Query: 484 XXXXXXXXXXXXXXXSIYGEDGGCLKQIREISDAKITITDSRPGAKETLIIISGTPERTH 305
                           IYGEDG CLKQIR+ISDAKITI + +PGA ET+IIISGTPE+TH
Sbjct: 604 TSTTIEVIVPRTIVPVIYGEDGACLKQIRQISDAKITINEPKPGASETVIIISGTPEQTH 663

Query: 304 AAQSLIQAFVLVETEGS 254
           AAQSLIQAFV+ E E S
Sbjct: 664 AAQSLIQAFVMSERESS 680


>ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 679

 Score =  151 bits (382), Expect = 1e-34
 Identities = 77/137 (56%), Positives = 90/137 (65%)
 Frame = -3

Query: 664 NFHTPGFPHHMSERSPASAPWGPQRIARGEPGGPLGFPDFAGVPQRRIDRFGGGGHQAVI 485
           N H PG P H   +     PWGPQ +   E GGP+G P+F G PQRRI  FGG  H A+I
Sbjct: 550 NIHRPGMPPHFERK-----PWGPQGLM--EAGGPMGLPEFGGHPQRRISGFGGVNHPAII 602

Query: 484 XXXXXXXXXXXXXXXSIYGEDGGCLKQIREISDAKITITDSRPGAKETLIIISGTPERTH 305
                           IYGEDG CLKQIR+ISDAKIT+T+ +PGA ET+IIISGTPE+TH
Sbjct: 603 TSTTVEVVVPRSVVPVIYGEDGACLKQIRQISDAKITVTEPKPGAAETVIIISGTPEQTH 662

Query: 304 AAQSLIQAFVLVETEGS 254
           AAQSLIQAFV+ E E +
Sbjct: 663 AAQSLIQAFVMSERESA 679


>ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 676

 Score =  138 bits (348), Expect = 8e-31
 Identities = 77/135 (57%), Positives = 85/135 (62%)
 Frame = -3

Query: 664 NFHTPGFPHHMSERSPASAPWGPQRIARGEPGGPLGFPDFAGVPQRRIDRFGGGGHQAVI 485
           + H PG P H+SER P    WGPQ I  G  G P+G PDF G P RRI  F GG  Q +I
Sbjct: 547 SIHRPGLPPHISERKP----WGPQGILEG--GIPIGLPDFPGGPPRRISGFAGGS-QPII 599

Query: 484 XXXXXXXXXXXXXXXSIYGEDGGCLKQIREISDAKITITDSRPGAKETLIIISGTPERTH 305
                           IYGEDG CLKQI +ISDA ITITD +PG  ET IIISGTPE+TH
Sbjct: 600 TSTTVEVVVPRAVVPVIYGEDGECLKQILQISDANITITDPKPGTVETKIIISGTPEQTH 659

Query: 304 AAQSLIQAFVLVETE 260
           AAQSLIQAFV+ E E
Sbjct: 660 AAQSLIQAFVMSERE 674


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