BLASTX nr result

ID: Atractylodes21_contig00030709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030709
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat...    65   6e-09
ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat...    64   2e-08
ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat...    64   2e-08
emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]    62   4e-08
ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat...    62   5e-08

>ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/82 (37%), Positives = 55/82 (67%)
 Frame = -1

Query: 316 EGLIEEAKELVIKMEKNGVFPNSVTYNIILQGILKWKESKDVLLHLKEMDARGFSVDASS 137
           EGL+++A+EL+ KM++NG  PN  +YN+ +QG+L+  +      +L+ M  +GF VDA++
Sbjct: 485 EGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATT 544

Query: 136 FFLLLHAIPAKEQDSKFADLVQ 71
             LL+  + A E+D+ F + +Q
Sbjct: 545 AELLIRFLSANEEDNAFQEFLQ 566


>ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/82 (37%), Positives = 53/82 (64%)
 Frame = -1

Query: 316 EGLIEEAKELVIKMEKNGVFPNSVTYNIILQGILKWKESKDVLLHLKEMDARGFSVDASS 137
           EGL+++A+EL+ KM++NG  PN  +YN+ +QG+L+  +      +L+ M  +GF VDA++
Sbjct: 512 EGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATT 571

Query: 136 FFLLLHAIPAKEQDSKFADLVQ 71
             LL+  + A E+D  F +  Q
Sbjct: 572 AELLIRFLSANEEDKSFKEFPQ 593


>ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/81 (35%), Positives = 53/81 (65%)
 Frame = -1

Query: 316 EGLIEEAKELVIKMEKNGVFPNSVTYNIILQGILKWKESKDVLLHLKEMDARGFSVDASS 137
           +G +++A++L+I ME+NG  PN+ TYN+ +QG+L  KE    + +L  M  +GFSVDA++
Sbjct: 510 QGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAAT 569

Query: 136 FFLLLHAIPAKEQDSKFADLV 74
              +++ +   E D+K  + +
Sbjct: 570 TEFIINYLSTNEGDTKIREFL 590


>emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
 Frame = -1

Query: 316 EGLIEEAKELVIKMEKNGVFPNSVTYNIILQGILKWKESKDVLLHLKEMDARGFSVDASS 137
           +GL+ EA +L  +M KNG  PN  TYN+I +G L+  E+   +  L+EM ARGFSVD S+
Sbjct: 503 QGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST 562

Query: 136 FFLLLHAIPAKEQDSKFADLVQKLV------PRDILKYKFW 32
             LL+  +     D     ++ K+V        + L ++FW
Sbjct: 563 TTLLVGMLSDDGLDQSVKQILCKIVILYERNLGETLLFQFW 603


>ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/85 (35%), Positives = 54/85 (63%)
 Frame = -1

Query: 316 EGLIEEAKELVIKMEKNGVFPNSVTYNIILQGILKWKESKDVLLHLKEMDARGFSVDASS 137
           EGL+++A++L++KME+NG  P+  TYN+ +QG+L+  E      +L  M  +GF  +A++
Sbjct: 459 EGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATT 518

Query: 136 FFLLLHAIPAKEQDSKFADLVQKLV 62
             LL++   A +++  F   +QK V
Sbjct: 519 TKLLINYFSANKENRAFQVFLQKFV 543


Top