BLASTX nr result

ID: Atractylodes21_contig00030674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030674
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-...   120   3e-25
emb|CBI30552.3| unnamed protein product [Vitis vinifera]              120   3e-25
ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   118   8e-25
ref|XP_004156647.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   116   4e-24
ref|XP_004137939.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   116   4e-24

>ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Vitis vinifera]
          Length = 2048

 Score =  120 bits (300), Expect = 3e-25
 Identities = 68/127 (53%), Positives = 86/127 (67%), Gaps = 8/127 (6%)
 Frame = +2

Query: 278 SPSEPNTPLLSPKDRILKRLVLIGVPEESLEHLESGLVAYIKENHQRIPEIVSAILPTDV 457
           SP+E N+  L P+ RI++RL L GVPEE LE LE GLVAY+KEN  R+PE+VSAILPT+ 
Sbjct: 5   SPAESNS--LPPRYRIVQRLSLQGVPEEHLERLEPGLVAYVKENKFRVPELVSAILPTE- 61

Query: 458 ETEAAMEAQSDPARSSTEDLL--------HESMTWLQWLMFVGDPGDVLQRLAIMNVGRR 613
             E  +EA  +   SS EDL+         ESM  LQWLMF G+P   L +LA ++ G+R
Sbjct: 62  --EEVLEAYKECKASSKEDLVSPTMTEQFRESMRLLQWLMFYGEPLSALNKLAKISTGQR 119

Query: 614 GVCGAVW 634
           GVCG+VW
Sbjct: 120 GVCGSVW 126


>emb|CBI30552.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  120 bits (300), Expect = 3e-25
 Identities = 68/127 (53%), Positives = 86/127 (67%), Gaps = 8/127 (6%)
 Frame = +2

Query: 278 SPSEPNTPLLSPKDRILKRLVLIGVPEESLEHLESGLVAYIKENHQRIPEIVSAILPTDV 457
           SP+E N+  L P+ RI++RL L GVPEE LE LE GLVAY+KEN  R+PE+VSAILPT+ 
Sbjct: 7   SPAESNS--LPPRYRIVQRLSLQGVPEEHLERLEPGLVAYVKENKFRVPELVSAILPTE- 63

Query: 458 ETEAAMEAQSDPARSSTEDLL--------HESMTWLQWLMFVGDPGDVLQRLAIMNVGRR 613
             E  +EA  +   SS EDL+         ESM  LQWLMF G+P   L +LA ++ G+R
Sbjct: 64  --EEVLEAYKECKASSKEDLVSPTMTEQFRESMRLLQWLMFYGEPLSALNKLAKISTGQR 121

Query: 614 GVCGAVW 634
           GVCG+VW
Sbjct: 122 GVCGSVW 128


>ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2036

 Score =  118 bits (296), Expect = 8e-25
 Identities = 61/123 (49%), Positives = 84/123 (68%), Gaps = 4/123 (3%)
 Frame = +2

Query: 278 SPSEPNTPLLSPKDRILKRLVLIGVPEESLEHLESGLVAYIKENHQRIPEIVSAILPTDV 457
           S S+P    L P+DR+++RL   GVPEE L+  + GLVA++K+    IPE+VS ILPTD 
Sbjct: 7   SDSQP----LKPRDRVVRRLAQFGVPEEQLD--QPGLVAFVKDKRALIPELVSVILPTDA 60

Query: 458 ETEAAMEAQSDPARSSTEDLL----HESMTWLQWLMFVGDPGDVLQRLAIMNVGRRGVCG 625
           E   A EA+    +++   ++    +ESM WLQWLMF GDPG  L+RL+ M+VG+RGVCG
Sbjct: 61  EVADAWEAKFSSKKTAVGVIMKKRFNESMVWLQWLMFEGDPGGALRRLSKMSVGQRGVCG 120

Query: 626 AVW 634
           +VW
Sbjct: 121 SVW 123


>ref|XP_004156647.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UBR1-like [Cucumis sativus]
          Length = 2089

 Score =  116 bits (290), Expect = 4e-24
 Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 5/124 (4%)
 Frame = +2

Query: 278 SPSEPNTPLLSPKDRILKRLVLIGVPEESLEHLESGLVAYIKENHQRIPEIVSAILPTDV 457
           SPSE  +  L P+DRIL+RL ++GVP+E L+ L  GLV ++K+N   IPE+VSAILPTDV
Sbjct: 8   SPSE--SAPLKPRDRILRRLAVLGVPDELLDQLFRGLVTFVKDNKFLIPELVSAILPTDV 65

Query: 458 ET-----EAAMEAQSDPARSSTEDLLHESMTWLQWLMFVGDPGDVLQRLAIMNVGRRGVC 622
           E      +A   A+   A  + +    ESM WLQWLMF  +P   L+ L+ M+VG+RGVC
Sbjct: 66  EVVEVIRDAIPGAKKSLAGPTMKANFRESMMWLQWLMFESEPAYALKNLSKMSVGQRGVC 125

Query: 623 GAVW 634
           GAVW
Sbjct: 126 GAVW 129


>ref|XP_004137939.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UBR1-like [Cucumis sativus]
          Length = 2099

 Score =  116 bits (290), Expect = 4e-24
 Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 5/124 (4%)
 Frame = +2

Query: 278 SPSEPNTPLLSPKDRILKRLVLIGVPEESLEHLESGLVAYIKENHQRIPEIVSAILPTDV 457
           SPSE  +  L P+DRIL+RL ++GVP+E L+ L  GLV ++K+N   IPE+VSAILPTDV
Sbjct: 8   SPSE--SAPLKPRDRILRRLAVLGVPDELLDQLFRGLVTFVKDNKFLIPELVSAILPTDV 65

Query: 458 ET-----EAAMEAQSDPARSSTEDLLHESMTWLQWLMFVGDPGDVLQRLAIMNVGRRGVC 622
           E      +A   A+   A  + +    ESM WLQWLMF  +P   L+ L+ M+VG+RGVC
Sbjct: 66  EVVEVIRDAIPGAKKSLAGPTMKANFRESMMWLQWLMFESEPAYALKNLSKMSVGQRGVC 125

Query: 623 GAVW 634
           GAVW
Sbjct: 126 GAVW 129


Top