BLASTX nr result
ID: Atractylodes21_contig00030601
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00030601
(402 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi... 185 4e-45
ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containi... 181 4e-44
ref|XP_002324255.1| predicted protein [Populus trichocarpa] gi|2... 174 7e-42
ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 171 7e-41
ref|XP_002516590.1| pentatricopeptide repeat-containing protein,... 169 2e-40
>ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 185 bits (469), Expect = 4e-45
Identities = 85/133 (63%), Positives = 107/133 (80%)
Frame = +1
Query: 4 DLAKQLHGHVLKSGVQSNIVIENSLLDMYVKCDGITHGHKVFDEMTERDVISWNSLIYGH 183
DL KQ+HGHV K G +SN V+ENSL++MYVKCD + HKVF+EMTERD +SWN+LI GH
Sbjct: 134 DLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGH 193
Query: 184 IKLGQMKRARELFEGMPEKSIVSWTAMISGYTQNGRNVDALHIFRMMQLAGVKPDWISLL 363
++LGQM+RAR +FE M +K+I SWTA++SGY + G DAL FR MQ+ G++PD ISL+
Sbjct: 194 VRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLV 253
Query: 364 SVLPACTQLGALE 402
SVLPAC QLGALE
Sbjct: 254 SVLPACAQLGALE 266
Score = 78.6 bits (192), Expect = 5e-13
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Frame = +1
Query: 1 LDLAKQLHGHVLKSGVQSNIVIENSLLDMYVKCDGITHGHKVFDEMTERDVISWNSLIYG 180
L+L K +H + K+G NI + N+L++MY KC I G ++FD+M ERDVISW+++I G
Sbjct: 265 LELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVG 324
Query: 181 HIKLGQMKRARELFEGMP----EKSIVSWTAMISGYTQNGRNVDALHIFRMMQ 327
G+ A ELF+ M E +I+++ ++S G + L F M+
Sbjct: 325 LANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMK 377
>ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 181 bits (460), Expect = 4e-44
Identities = 83/133 (62%), Positives = 106/133 (79%)
Frame = +1
Query: 4 DLAKQLHGHVLKSGVQSNIVIENSLLDMYVKCDGITHGHKVFDEMTERDVISWNSLIYGH 183
DL KQ+HGHV K G +SN V+ENSL++MYVKCD + H+VF+EMTERD +SWN+LI GH
Sbjct: 134 DLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGH 193
Query: 184 IKLGQMKRARELFEGMPEKSIVSWTAMISGYTQNGRNVDALHIFRMMQLAGVKPDWISLL 363
++LGQM+RAR +FE M +K+I SWTA++SGY + G DAL FR MQ+ G++PD ISL+
Sbjct: 194 VRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLV 253
Query: 364 SVLPACTQLGALE 402
SVLP C QLGALE
Sbjct: 254 SVLPDCAQLGALE 266
Score = 79.0 bits (193), Expect = 4e-13
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Frame = +1
Query: 1 LDLAKQLHGHVLKSGVQSNIVIENSLLDMYVKCDGITHGHKVFDEMTERDVISWNSLIYG 180
L+L K +H + K+G NI + N+L++MY KC I G ++FD+M ERDVISW+++I G
Sbjct: 265 LELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVG 324
Query: 181 HIKLGQMKRARELFEGMP----EKSIVSWTAMISGYTQNGRNVDALHIFRMMQ 327
G+ + A ELF+ M E SI+++ +++ G + L F M+
Sbjct: 325 LANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMK 377
>ref|XP_002324255.1| predicted protein [Populus trichocarpa] gi|222865689|gb|EEF02820.1|
predicted protein [Populus trichocarpa]
Length = 547
Score = 174 bits (441), Expect = 7e-42
Identities = 81/133 (60%), Positives = 104/133 (78%)
Frame = +1
Query: 4 DLAKQLHGHVLKSGVQSNIVIENSLLDMYVKCDGITHGHKVFDEMTERDVISWNSLIYGH 183
+L KQ+H H+ K G +SNI +EN+L+DMY KC + HKVFD M ERD ISWNS+I GH
Sbjct: 136 NLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGH 195
Query: 184 IKLGQMKRARELFEGMPEKSIVSWTAMISGYTQNGRNVDALHIFRMMQLAGVKPDWISLL 363
+ +GQM++A LF+ MP ++IVSWTAMISGYT+ G DAL++FR MQ+ GV+PD IS++
Sbjct: 196 VGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISII 255
Query: 364 SVLPACTQLGALE 402
SVLPAC QLGALE
Sbjct: 256 SVLPACAQLGALE 268
Score = 59.7 bits (143), Expect = 2e-07
Identities = 37/131 (28%), Positives = 66/131 (50%)
Frame = +1
Query: 1 LDLAKQLHGHVLKSGVQSNIVIENSLLDMYVKCDGITHGHKVFDEMTERDVISWNSLIYG 180
L++ K +H + ++G+ I N+L++MY KC I +++FD+M++ DVISW+++I G
Sbjct: 267 LEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGG 326
Query: 181 HIKLGQMKRARELFEGMPEKSIVSWTAMISGYTQNGRNVDALHIFRMMQLAGVKPDWISL 360
L +ARE A+ +F+ M+ A ++P+ I+
Sbjct: 327 ---LANHGKARE----------------------------AIELFKRMKKAKIEPNGITF 355
Query: 361 LSVLPACTQLG 393
L +L AC G
Sbjct: 356 LGLLSACAHAG 366
>ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 171 bits (432), Expect = 7e-41
Identities = 79/133 (59%), Positives = 104/133 (78%)
Frame = +1
Query: 4 DLAKQLHGHVLKSGVQSNIVIENSLLDMYVKCDGITHGHKVFDEMTERDVISWNSLIYGH 183
+L KQ+HGH K G +SN VIENSL++MYVKCD + H+VF+EMTERD +SWN+LI GH
Sbjct: 108 NLGKQVHGHAFKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGH 167
Query: 184 IKLGQMKRARELFEGMPEKSIVSWTAMISGYTQNGRNVDALHIFRMMQLAGVKPDWISLL 363
++LGQM+RAR +FE + +K+I SWTA++SGY + G + AL FR MQ+ ++ D ISL+
Sbjct: 168 VRLGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLV 227
Query: 364 SVLPACTQLGALE 402
SVLPAC QLGALE
Sbjct: 228 SVLPACAQLGALE 240
Score = 67.4 bits (163), Expect = 1e-09
Identities = 33/85 (38%), Positives = 50/85 (58%)
Frame = +1
Query: 145 RDVISWNSLIYGHIKLGQMKRARELFEGMPEKSIVSWTAMISGYTQNGRNVDALHIFRMM 324
RD+ N+LI + K G M R LF M E+ ++SW+ MI G +GR +A+ +F+ M
Sbjct: 256 RDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIVGLANHGRAREAIELFQEM 315
Query: 325 QLAGVKPDWISLLSVLPACTQLGAL 399
Q A V+P+ I+ + +L AC G L
Sbjct: 316 QKAKVEPNIITFVGLLSACAHAGLL 340
Score = 66.6 bits (161), Expect = 2e-09
Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Frame = +1
Query: 1 LDLAKQLHGHVLKSGVQSNIVIENSLLDMYVKCDGITHGHKVFDEMTERDVISWNSLIYG 180
L+L K +H + K+G +I + N+L+++Y K + G ++F +M ERDVISW+++I G
Sbjct: 239 LELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIVG 298
Query: 181 HIKLGQMKRARELFEGMP----EKSIVSWTAMISGYTQNGRNVDALHIFRMMQ 327
G+ + A ELF+ M E +I+++ ++S G + L F M+
Sbjct: 299 LANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESME 351
>ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544410|gb|EEF45931.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 517
Score = 169 bits (429), Expect = 2e-40
Identities = 76/133 (57%), Positives = 103/133 (77%)
Frame = +1
Query: 4 DLAKQLHGHVLKSGVQSNIVIENSLLDMYVKCDGITHGHKVFDEMTERDVISWNSLIYGH 183
+L KQ+H K G +S+++ EN+L+DMY KCD + H +FDEM ER ISWN +I GH
Sbjct: 112 NLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGH 171
Query: 184 IKLGQMKRARELFEGMPEKSIVSWTAMISGYTQNGRNVDALHIFRMMQLAGVKPDWISLL 363
++LGQM+RAR LF+ MP ++IVSWTA+ISGYT+ G +DAL +FR MQ+AG++PD S++
Sbjct: 172 VRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASII 231
Query: 364 SVLPACTQLGALE 402
SVLPAC +LGALE
Sbjct: 232 SVLPACAKLGALE 244
Score = 60.1 bits (144), Expect = 2e-07
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Frame = +1
Query: 1 LDLAKQLHGHVLKSGVQSNIVIENSLLDMYVKCDGITHGHKVFDEMTERDVISWNSLIYG 180
L+ K +H ++G+ I N+L++MY KC I ++FD+M RDVISW+++I G
Sbjct: 243 LETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGG 302
Query: 181 HIKLGQMKRARELFEGMPEKSI----VSWTAMISGYTQNGRNVDALHIFRMMQ 327
G+++ A +FE M + +I +++ ++S G + L F M+
Sbjct: 303 LANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMK 355