BLASTX nr result

ID: Atractylodes21_contig00030496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030496
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511274.1| replication factor C / DNA polymerase III ga...   178   5e-43
ref|XP_003528127.1| PREDICTED: uncharacterized protein LOC100812...   174   7e-42
ref|XP_003522412.1| PREDICTED: uncharacterized protein LOC100819...   169   2e-40
emb|CBI14898.3| unnamed protein product [Vitis vinifera]              168   4e-40
ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40

>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223550389|gb|EEF51876.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1025

 Score =  178 bits (451), Expect = 5e-43
 Identities = 81/118 (68%), Positives = 100/118 (84%)
 Frame = -1

Query: 355 RGSGKTSAARIFAAALNCLSLEDNKPCGQCQECTLFFAGRSRDVKELDSVSMNQAENLRY 176
           RG+GKTSA+RIFAAALNCLSLE+ KPCG C+EC  FF+GRSRDVKE+DSV +N+ E +R 
Sbjct: 336 RGTGKTSASRIFAAALNCLSLEEYKPCGLCRECVQFFSGRSRDVKEVDSVRINRVERIRA 395

Query: 175 LIKNAMLPPVSSSFKVFIIDECQQMQGSTWAALVNSLEEVSRHIVFIMITPDLSKLPR 2
           LIKNA +PPVSS FKVFI+DEC  +QG TWA ++NSLE + +H+VF+M+TP L KLPR
Sbjct: 396 LIKNAAIPPVSSRFKVFIVDECHLLQGETWATILNSLENLPQHVVFVMVTPHLDKLPR 453


>ref|XP_003528127.1| PREDICTED: uncharacterized protein LOC100812040 [Glycine max]
          Length = 979

 Score =  174 bits (441), Expect = 7e-42
 Identities = 78/118 (66%), Positives = 102/118 (86%)
 Frame = -1

Query: 355 RGSGKTSAARIFAAALNCLSLEDNKPCGQCQECTLFFAGRSRDVKELDSVSMNQAENLRY 176
           RG+GKTS +R+FAAALNCLS+ + +PCG C+EC L F+GR++DVKE+DSV++N+AE ++ 
Sbjct: 341 RGTGKTSTSRMFAAALNCLSVVEKRPCGLCRECVLLFSGRNKDVKEVDSVTINRAEQVKS 400

Query: 175 LIKNAMLPPVSSSFKVFIIDECQQMQGSTWAALVNSLEEVSRHIVFIMITPDLSKLPR 2
           LIKNA +PPVSS FKVFIIDECQ + G TWA++ NSLE +S+H+VF+MITPDL KLPR
Sbjct: 401 LIKNASIPPVSSRFKVFIIDECQLLNGETWASISNSLENLSQHVVFVMITPDLDKLPR 458


>ref|XP_003522412.1| PREDICTED: uncharacterized protein LOC100819111 [Glycine max]
          Length = 952

 Score =  169 bits (428), Expect = 2e-40
 Identities = 76/117 (64%), Positives = 100/117 (85%)
 Frame = -1

Query: 355 RGSGKTSAARIFAAALNCLSLEDNKPCGQCQECTLFFAGRSRDVKELDSVSMNQAENLRY 176
           RG+GKTSA+R+FAAALNCLS+ + +PCG C+EC L F+GRS+DVKE+DSV +N+A+ ++ 
Sbjct: 341 RGTGKTSASRMFAAALNCLSVVEQRPCGLCRECVLLFSGRSKDVKEVDSVRINRADQVKS 400

Query: 175 LIKNAMLPPVSSSFKVFIIDECQQMQGSTWAALVNSLEEVSRHIVFIMITPDLSKLP 5
           LIKNA +PPVSS FKVF IDECQ + G TWA++ NSLE +S+++VF+MITPDL KLP
Sbjct: 401 LIKNASIPPVSSRFKVFFIDECQLLNGETWASISNSLENLSQYVVFVMITPDLDKLP 457


>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  168 bits (426), Expect = 4e-40
 Identities = 78/118 (66%), Positives = 100/118 (84%)
 Frame = -1

Query: 355 RGSGKTSAARIFAAALNCLSLEDNKPCGQCQECTLFFAGRSRDVKELDSVSMNQAENLRY 176
           RG+GKTSA+RIFAAALNCLSLE+++PCG C+EC LFF+GRSRD KE+D+V +NQ   +R 
Sbjct: 196 RGTGKTSASRIFAAALNCLSLEEHRPCGLCRECVLFFSGRSRDSKEIDTVRINQTGRMRS 255

Query: 175 LIKNAMLPPVSSSFKVFIIDECQQMQGSTWAALVNSLEEVSRHIVFIMITPDLSKLPR 2
           LIK+A+  PVSS FKVFIIDEC  ++G TWA ++NSL+++ +H+VFIMITP L KLPR
Sbjct: 256 LIKHAIGRPVSSRFKVFIIDECHLLRGETWATVLNSLDDLPQHVVFIMITPSLDKLPR 313


>ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|222868653|gb|EEF05784.1|
           predicted protein [Populus trichocarpa]
          Length = 907

 Score =  167 bits (424), Expect = 6e-40
 Identities = 75/118 (63%), Positives = 99/118 (83%)
 Frame = -1

Query: 355 RGSGKTSAARIFAAALNCLSLEDNKPCGQCQECTLFFAGRSRDVKELDSVSMNQAENLRY 176
           RG+GKTSA++IFAAALNCLS E+NKPCG C+EC +FF+GRS+DVKE+DSV +NQ   +R 
Sbjct: 292 RGTGKTSASKIFAAALNCLSHEENKPCGLCRECYVFFSGRSQDVKEVDSVRINQTRRIRS 351

Query: 175 LIKNAMLPPVSSSFKVFIIDECQQMQGSTWAALVNSLEEVSRHIVFIMITPDLSKLPR 2
           LIK+A +PP+SS FKVFI+DEC  + G TWA ++NSLE +S ++VF+MITP+L  LP+
Sbjct: 352 LIKDASMPPISSRFKVFIVDECHLLHGETWAIVLNSLENLSENVVFVMITPELDMLPK 409


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