BLASTX nr result

ID: Atractylodes21_contig00030485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030485
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...   176   2e-42
emb|CBI16626.3| unnamed protein product [Vitis vinifera]              176   2e-42
emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]   176   2e-42
ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223...   167   8e-40
ref|XP_002326828.1| chromatin remodeling complex subunit [Populu...   166   2e-39

>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
           vinifera]
          Length = 876

 Score =  176 bits (445), Expect = 2e-42
 Identities = 91/147 (61%), Positives = 109/147 (74%)
 Frame = -1

Query: 443 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVMSIILVTERTVEEVIMHRAER 264
           VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV+SI LVT RTVEE+IM RAER
Sbjct: 457 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAER 516

Query: 263 KLQLSYDVIGEDAIDRDGKDMVGVAAGDLRSVVLGLRMFDPTTESKESSDELDMSXXXXX 84
           KLQLS++V+GE  IDR+GK+M G  AGDLRSV+ GLRM DP+  + + S E +MS     
Sbjct: 517 KLQLSHNVVGEVDIDREGKEMAGAEAGDLRSVIFGLRMIDPSEINNDESSEPNMSELDAM 576

Query: 83  XXXXXXVRDGGRSEAEGGKVDINSKDV 3
                 +R   +   +  K ++N  D+
Sbjct: 577 ADKVVAIRHEQQLGKDDRKFEVNPMDL 603


>emb|CBI16626.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  176 bits (445), Expect = 2e-42
 Identities = 91/147 (61%), Positives = 109/147 (74%)
 Frame = -1

Query: 443 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVMSIILVTERTVEEVIMHRAER 264
           VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV+SI LVT RTVEE+IM RAER
Sbjct: 456 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAER 515

Query: 263 KLQLSYDVIGEDAIDRDGKDMVGVAAGDLRSVVLGLRMFDPTTESKESSDELDMSXXXXX 84
           KLQLS++V+GE  IDR+GK+M G  AGDLRSV+ GLRM DP+  + + S E +MS     
Sbjct: 516 KLQLSHNVVGEVDIDREGKEMAGAEAGDLRSVIFGLRMIDPSEINNDESSEPNMSELDAM 575

Query: 83  XXXXXXVRDGGRSEAEGGKVDINSKDV 3
                 +R   +   +  K ++N  D+
Sbjct: 576 ADKVVAIRHEQQLGKDDRKFEVNPMDL 602


>emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]
          Length = 1054

 Score =  176 bits (445), Expect = 2e-42
 Identities = 91/147 (61%), Positives = 109/147 (74%)
 Frame = -1

Query: 443 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVMSIILVTERTVEEVIMHRAER 264
           VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV+SI LVT RTVEE+IM RAER
Sbjct: 537 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAER 596

Query: 263 KLQLSYDVIGEDAIDRDGKDMVGVAAGDLRSVVLGLRMFDPTTESKESSDELDMSXXXXX 84
           KLQLS++V+GE  IDR+GK+M G  AGDLRSV+ GLRM DP+  + + S E +MS     
Sbjct: 597 KLQLSHNVVGEVDIDREGKEMAGAEAGDLRSVIFGLRMIDPSEINNDESSEPNMSELDAM 656

Query: 83  XXXXXXVRDGGRSEAEGGKVDINSKDV 3
                 +R   +   +  K ++N  D+
Sbjct: 657 ADKVVAIRHEQQLGKDDRKFEVNPMDL 683


>ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1|
           helicase, putative [Ricinus communis]
          Length = 860

 Score =  167 bits (423), Expect = 8e-40
 Identities = 86/146 (58%), Positives = 105/146 (71%)
 Frame = -1

Query: 443 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVMSIILVTERTVEEVIMHRAER 264
           VGLNLVAADTVIFYEQDWNPQVDKQA+QRAHRIGQMNHV+SI LVT  TVEEVIM RAE+
Sbjct: 446 VGLNLVAADTVIFYEQDWNPQVDKQAVQRAHRIGQMNHVLSINLVTRHTVEEVIMRRAEK 505

Query: 263 KLQLSYDVIGEDAIDRDGKDMVGVAAGDLRSVVLGLRMFDPTTESKESSDELDMSXXXXX 84
           KLQLS +V+G+D +++ GK+ VGV   DLRS++ GL +FDP+    E  DEL+M      
Sbjct: 506 KLQLSNNVLGDDVMEQKGKEPVGVETVDLRSIIFGLHIFDPSEIITEKPDELNMPELNAM 565

Query: 83  XXXXXXVRDGGRSEAEGGKVDINSKD 6
                 +RD      +GGK  ++  D
Sbjct: 566 IVKVIGIRDDQGLAKDGGKYKLDQVD 591


>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222835143|gb|EEE73578.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 866

 Score =  166 bits (419), Expect = 2e-39
 Identities = 80/115 (69%), Positives = 96/115 (83%)
 Frame = -1

Query: 443 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVMSIILVTERTVEEVIMHRAER 264
           VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV+SI LVT  +VEEVIM RA+R
Sbjct: 451 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTRHSVEEVIMQRAKR 510

Query: 263 KLQLSYDVIGEDAIDRDGKDMVGVAAGDLRSVVLGLRMFDPTTESKESSDELDMS 99
           KLQLS+DV+G+D ++ D K+  G+  GDLRS++ GL  FDP+  + E S+EL+ S
Sbjct: 511 KLQLSHDVVGDDVMEEDRKETGGIETGDLRSIIFGLHRFDPSEVNSEKSNELNAS 565


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