BLASTX nr result

ID: Atractylodes21_contig00030403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030403
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
emb|CBI18516.3| unnamed protein product [Vitis vinifera]              123   2e-26
emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]   123   2e-26
ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
ref|XP_002522775.1| pentatricopeptide repeat-containing protein,...   107   8e-22

>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  123 bits (308), Expect = 2e-26
 Identities = 65/104 (62%), Positives = 76/104 (73%)
 Frame = -1

Query: 313  DGNRSKALMKQKNSGLELENSIYAILTISRWESLNQMNYKGASLRPVHGRLALKFLNWVI 134
            D  +S+A    + SG ++E+SIY ILTI RWESLN M Y    LRPVHGRLALKFL WVI
Sbjct: 793  DDAKSRAWNTTQTSGSDVESSIYTILTIDRWESLNHMAYGLKQLRPVHGRLALKFLKWVI 852

Query: 133  KQPAFQQLKNLTCVSCITVHILVKARMYASAKLILTQLSEMGIG 2
            KQP   +LK+LT + C+T HILVKARMY SAK IL  L +MGIG
Sbjct: 853  KQPGL-ELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIG 895


>emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  123 bits (308), Expect = 2e-26
 Identities = 65/104 (62%), Positives = 76/104 (73%)
 Frame = -1

Query: 313 DGNRSKALMKQKNSGLELENSIYAILTISRWESLNQMNYKGASLRPVHGRLALKFLNWVI 134
           D  +S+A    + SG ++E+SIY ILTI RWESLN M Y    LRPVHGRLALKFL WVI
Sbjct: 42  DDAKSRAWNTTQTSGSDVESSIYTILTIDRWESLNHMAYGLKQLRPVHGRLALKFLKWVI 101

Query: 133 KQPAFQQLKNLTCVSCITVHILVKARMYASAKLILTQLSEMGIG 2
           KQP   +LK+LT + C+T HILVKARMY SAK IL  L +MGIG
Sbjct: 102 KQPGL-ELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIG 144


>emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  123 bits (308), Expect = 2e-26
 Identities = 65/104 (62%), Positives = 76/104 (73%)
 Frame = -1

Query: 313 DGNRSKALMKQKNSGLELENSIYAILTISRWESLNQMNYKGASLRPVHGRLALKFLNWVI 134
           D  +S+A    + SG ++E+SIY ILTI RWESLN M Y    LRPVHGRLALKFL WVI
Sbjct: 42  DDAKSRAWNTTQTSGSDVESSIYTILTIDRWESLNHMAYGLKQLRPVHGRLALKFLKWVI 101

Query: 133 KQPAFQQLKNLTCVSCITVHILVKARMYASAKLILTQLSEMGIG 2
           KQP   +LK+LT + C+T HILVKARMY SAK IL  L +MGIG
Sbjct: 102 KQPGL-ELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIG 144


>ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  107 bits (268), Expect = 8e-22
 Identities = 55/87 (63%), Positives = 64/87 (73%)
 Frame = -1

Query: 262 LENSIYAILTISRWESLNQMNYKGASLRPVHGRLALKFLNWVIKQPAFQQLKNLTCVSCI 83
           +ENSIY ILTI RWESLN MNYK ASLRP+HG LALKFL WVIKQP  +   +LT +  I
Sbjct: 1   MENSIYTILTIGRWESLNHMNYKFASLRPIHGVLALKFLKWVIKQPGLEP-NHLTHILGI 59

Query: 82  TVHILVKARMYASAKLILTQLSEMGIG 2
           T H+LVKAR+Y  AK IL  L++   G
Sbjct: 60  TTHVLVKARLYGYAKSILKHLAQKNSG 86


>ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538013|gb|EEF39626.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1071

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/80 (67%), Positives = 65/80 (81%)
 Frame = -1

Query: 241 ILTISRWESLNQMNYKGASLRPVHGRLALKFLNWVIKQPAFQQLKNLTCVSCITVHILVK 62
           +LTI RWESLN M YK ASLRPVHGRLALKFLNWVI+QP   +L++LT +  IT HILV+
Sbjct: 1   MLTIDRWESLNHMEYKLASLRPVHGRLALKFLNWVIQQPGL-ELRHLTHMLSITTHILVR 59

Query: 61  ARMYASAKLILTQLSEMGIG 2
           AR+Y +AK IL  LS+MG+G
Sbjct: 60  ARLYENAKSILKHLSQMGVG 79


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