BLASTX nr result

ID: Atractylodes21_contig00030362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030362
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45
ref|NP_001175615.1| Os08g0466050 [Oryza sativa Japonica Group] g...   183   1e-44
gb|ACN33812.1| unknown [Zea mays]                                     183   1e-44
ref|NP_001147081.1| DNA polymerase epsilon subunit 2 [Zea mays] ...   183   1e-44
ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-...   182   2e-44

>ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|222858998|gb|EEE96545.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  184 bits (468), Expect = 5e-45
 Identities = 85/95 (89%), Positives = 88/95 (92%)
 Frame = -2

Query: 287 IFASNPCGIKFYTQEIVFFLQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCLL 108
           IFASNPC +KFYTQEIVFF  DLLYRMRRSCL+PPSTEET DPFEHLVATITHQSHLC L
Sbjct: 390 IFASNPCRVKFYTQEIVFFRHDLLYRMRRSCLMPPSTEETDDPFEHLVATITHQSHLCPL 449

Query: 107 ALIVQPIIWNYDHCLHLYPTPHTIVLGDNSEQKAF 3
            LIVQPIIWNYDHCLHLYP+PHTIVLGD SEQKAF
Sbjct: 450 PLIVQPIIWNYDHCLHLYPSPHTIVLGDRSEQKAF 484


>ref|NP_001175615.1| Os08g0466050 [Oryza sativa Japonica Group]
           gi|255678510|dbj|BAH94343.1| Os08g0466050 [Oryza sativa
           Japonica Group]
          Length = 311

 Score =  183 bits (464), Expect = 1e-44
 Identities = 85/95 (89%), Positives = 87/95 (91%)
 Frame = -2

Query: 287 IFASNPCGIKFYTQEIVFFLQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCLL 108
           IF SNPC +KFYTQEIVFF QDLLYRMRRSCLIPP+TEETSDPFEHLVATITHQSHLC L
Sbjct: 181 IFVSNPCRVKFYTQEIVFFQQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPL 240

Query: 107 ALIVQPIIWNYDHCLHLYPTPHTIVLGDNSEQKAF 3
            L VQPIIWNYDHCL LYPTPHTIVLGD SEQKAF
Sbjct: 241 PLTVQPIIWNYDHCLRLYPTPHTIVLGDKSEQKAF 275


>gb|ACN33812.1| unknown [Zea mays]
          Length = 533

 Score =  183 bits (464), Expect = 1e-44
 Identities = 85/95 (89%), Positives = 87/95 (91%)
 Frame = -2

Query: 287 IFASNPCGIKFYTQEIVFFLQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCLL 108
           IF SNPC +KFYTQEIVFF QDLLYRMRRSCLIPP+TEETSDPFEHLVATITHQSHLC L
Sbjct: 403 IFVSNPCRVKFYTQEIVFFRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPL 462

Query: 107 ALIVQPIIWNYDHCLHLYPTPHTIVLGDNSEQKAF 3
            L VQPIIWNYDHCL LYPTPHTIVLGD SEQKAF
Sbjct: 463 PLTVQPIIWNYDHCLRLYPTPHTIVLGDKSEQKAF 497


>ref|NP_001147081.1| DNA polymerase epsilon subunit 2 [Zea mays]
           gi|195607112|gb|ACG25386.1| DNA polymerase epsilon
           subunit 2 [Zea mays] gi|414869832|tpg|DAA48389.1| TPA:
           DNA polymerase epsilon subunit 2 [Zea mays]
          Length = 533

 Score =  183 bits (464), Expect = 1e-44
 Identities = 85/95 (89%), Positives = 87/95 (91%)
 Frame = -2

Query: 287 IFASNPCGIKFYTQEIVFFLQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCLL 108
           IF SNPC +KFYTQEIVFF QDLLYRMRRSCLIPP+TEETSDPFEHLVATITHQSHLC L
Sbjct: 403 IFVSNPCRVKFYTQEIVFFRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPL 462

Query: 107 ALIVQPIIWNYDHCLHLYPTPHTIVLGDNSEQKAF 3
            L VQPIIWNYDHCL LYPTPHTIVLGD SEQKAF
Sbjct: 463 PLTVQPIIWNYDHCLRLYPTPHTIVLGDKSEQKAF 497


>ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Cucumis sativus]
          Length = 536

 Score =  182 bits (463), Expect = 2e-44
 Identities = 82/95 (86%), Positives = 89/95 (93%)
 Frame = -2

Query: 287 IFASNPCGIKFYTQEIVFFLQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCLL 108
           IF+SNPC ++FYTQEIVFF QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLC L
Sbjct: 408 IFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPL 467

Query: 107 ALIVQPIIWNYDHCLHLYPTPHTIVLGDNSEQKAF 3
            L++QPIIWNYDHCLHLYPTPH IVLGD S+Q+AF
Sbjct: 468 PLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAF 502


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