BLASTX nr result

ID: Atractylodes21_contig00030354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030354
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   144   1e-32
gb|ACB28472.1| polyprotein [Ananas comosus]                           142   2e-32
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]   139   2e-31
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   139   2e-31
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...   139   3e-31

>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  144 bits (362), Expect = 1e-32
 Identities = 64/99 (64%), Positives = 80/99 (80%)
 Frame = -2

Query: 297  HFEFLVMPFGLTNAPSTFQGLMNHLFKPYLRRFVLVFFDDILIYSPDWDAHLQHLKTVMD 118
            HFE+LVMPFGLTNAP+TFQGLMN +FKP+LR+FVLVFFDDIL+YS   + H QHLK V +
Sbjct: 717  HFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSLEEHRQHLKQVFE 776

Query: 117  TLRVNSLLAKMNKCAFVVSQIEYLGHVLSRDGVATDLSK 1
             +R N L AK++KCAF V ++EYLGH +S  G+ TD +K
Sbjct: 777  VMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIETDPAK 815


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/99 (65%), Positives = 77/99 (77%)
 Frame = -2

Query: 297 HFEFLVMPFGLTNAPSTFQGLMNHLFKPYLRRFVLVFFDDILIYSPDWDAHLQHLKTVMD 118
           H+EFLVMPFGLTNAPSTFQGLMNH+FKPYLRRF+LVFFDDIL+YS   + HL HL+T   
Sbjct: 345 HYEFLVMPFGLTNAPSTFQGLMNHIFKPYLRRFILVFFDDILVYSKGVEEHLCHLRTTFQ 404

Query: 117 TLRVNSLLAKMNKCAFVVSQIEYLGHVLSRDGVATDLSK 1
            LR +SL  +  KC F   Q+EYLGHV+S +GV+ D  K
Sbjct: 405 VLRQHSLFVRRKKCIFAAVQLEYLGHVISHEGVSMDKKK 443


>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/99 (63%), Positives = 81/99 (81%)
 Frame = -2

Query: 297 HFEFLVMPFGLTNAPSTFQGLMNHLFKPYLRRFVLVFFDDILIYSPDWDAHLQHLKTVMD 118
           H+EFLVMPFGLTNAP+TFQ LMN +FKPYLR+F+LVFFDDIL+YS +   H+ HL+TV+D
Sbjct: 647 HYEFLVMPFGLTNAPATFQSLMNDIFKPYLRKFILVFFDDILVYSKNLADHVYHLQTVLD 706

Query: 117 TLRVNSLLAKMNKCAFVVSQIEYLGHVLSRDGVATDLSK 1
            L+ + L AK +KC F  S+IEYLGH++S+DGV  D +K
Sbjct: 707 ILKQHQLFAKKSKCCFGCSEIEYLGHLISKDGVQADPTK 745


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/99 (63%), Positives = 77/99 (77%)
 Frame = -2

Query: 297  HFEFLVMPFGLTNAPSTFQGLMNHLFKPYLRRFVLVFFDDILIYSPDWDAHLQHLKTVMD 118
            H+EFLVMPFGLTNAPSTFQ +MN LF+PYLR+FVLVFFDDIL+YSPD   HL+HL+TV+ 
Sbjct: 831  HYEFLVMPFGLTNAPSTFQSVMNDLFRPYLRKFVLVFFDDILVYSPDMKTHLKHLETVLQ 890

Query: 117  TLRVNSLLAKMNKCAFVVSQIEYLGHVLSRDGVATDLSK 1
             L ++   A   KC F  ++I YLGH++S  GVATD  K
Sbjct: 891  LLHLHQFYANFKKCTFGSTRISYLGHIISEQGVATDPEK 929


>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/99 (63%), Positives = 80/99 (80%)
 Frame = -2

Query: 297  HFEFLVMPFGLTNAPSTFQGLMNHLFKPYLRRFVLVFFDDILIYSPDWDAHLQHLKTVMD 118
            H+EFLVMPFGLTNAP+TFQ LMN +FKPYLR+FVLVFFDD+LIYS   + H +HL+ V+ 
Sbjct: 1902 HYEFLVMPFGLTNAPATFQALMNSIFKPYLRKFVLVFFDDVLIYSKTVEEHAEHLRLVLS 1961

Query: 117  TLRVNSLLAKMNKCAFVVSQIEYLGHVLSRDGVATDLSK 1
             L+ + LLA   KC+F + QIEYLGH++S++GVATD  K
Sbjct: 1962 VLQEHKLLANRKKCSFGLQQIEYLGHIISKNGVATDAIK 2000


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