BLASTX nr result

ID: Atractylodes21_contig00030338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030338
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containi...   132   4e-29
ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26
ref|XP_003625825.1| Pentatricopeptide repeat-containing protein ...   116   2e-24
ref|XP_002879598.1| hypothetical protein ARALYDRAFT_902735 [Arab...   112   4e-23

>ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Vitis vinifera]
          Length = 480

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/88 (71%), Positives = 73/88 (82%)
 Frame = -1

Query: 265 DLHVFRHAATLDSFRHDHSTYEWMVRTLAITHRLDSLSSVLDFIVCNPCPCSDGIFSCSR 86
           DLH+F  AAT+DSFRHDHSTYEWMV+TLAIT R D L S+L  +V NPCPCSDGIFSC R
Sbjct: 83  DLHIFTWAATIDSFRHDHSTYEWMVKTLAITDRFDDLHSLLQGMVSNPCPCSDGIFSCPR 142

Query: 85  TEPIFRFAINSFCNVGRFDDAVHAFDNM 2
           +EPIFRFA+N+FC VGR +DA  AF +M
Sbjct: 143 SEPIFRFALNAFCRVGRLEDAEIAFASM 170


>ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Vitis vinifera]
          Length = 588

 Score =  132 bits (331), Expect = 4e-29
 Identities = 60/88 (68%), Positives = 72/88 (81%)
 Frame = -1

Query: 265 DLHVFRHAATLDSFRHDHSTYEWMVRTLAITHRLDSLSSVLDFIVCNPCPCSDGIFSCSR 86
           DLH+F  AAT+DSFRHD STYEWMV+TLAIT R D L S+L  +V NPCP SDGIFSC R
Sbjct: 191 DLHIFTWAATIDSFRHDQSTYEWMVKTLAITDRFDDLHSLLQGMVSNPCPYSDGIFSCPR 250

Query: 85  TEPIFRFAINSFCNVGRFDDAVHAFDNM 2
           +EPIFRFA+N+FC VGR +DA  +F++M
Sbjct: 251 SEPIFRFALNAFCRVGRLEDAEISFESM 278


>ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Cucumis sativus]
           gi|449487417|ref|XP_004157616.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g36240-like [Cucumis sativus]
          Length = 486

 Score =  122 bits (306), Expect = 3e-26
 Identities = 53/88 (60%), Positives = 69/88 (78%)
 Frame = -1

Query: 265 DLHVFRHAATLDSFRHDHSTYEWMVRTLAITHRLDSLSSVLDFIVCNPCPCSDGIFSCSR 86
           D HVF  A+T+DSFRHDHST+ WM RTLA T R   L+S+L F+  +PCPCSDGIFSC +
Sbjct: 87  DFHVFNWASTIDSFRHDHSTFAWMARTLATTDRFFELTSLLRFLASSPCPCSDGIFSCPQ 146

Query: 85  TEPIFRFAINSFCNVGRFDDAVHAFDNM 2
           TE IF+F+I+++C   +FD+AV AFD+M
Sbjct: 147 TESIFQFSISAYCRARKFDEAVFAFDSM 174


>ref|XP_003625825.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500840|gb|AES82043.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 485

 Score =  116 bits (291), Expect = 2e-24
 Identities = 51/88 (57%), Positives = 66/88 (75%)
 Frame = -1

Query: 265 DLHVFRHAATLDSFRHDHSTYEWMVRTLAITHRLDSLSSVLDFIVCNPCPCSDGIFSCSR 86
           D H+F  A+TLD+F H+H++YEWM RTLA++HR   L ++L FI  NPC CS  IFSC +
Sbjct: 81  DFHLFSWASTLDTFSHNHTSYEWMTRTLALSHRFSLLRTLLTFISTNPCQCSQAIFSCPQ 140

Query: 85  TEPIFRFAINSFCNVGRFDDAVHAFDNM 2
           TEPIFRFAI  +C   +FDDAV+AF+ M
Sbjct: 141 TEPIFRFAIQYYCKAFKFDDAVYAFNVM 168


>ref|XP_002879598.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
           lyrata] gi|297325437|gb|EFH55857.1| hypothetical protein
           ARALYDRAFT_902735 [Arabidopsis lyrata subsp. lyrata]
          Length = 497

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/88 (56%), Positives = 61/88 (69%)
 Frame = -1

Query: 265 DLHVFRHAATLDSFRHDHSTYEWMVRTLAITHRLDSLSSVLDFIVCNPCPCSDGIFSCSR 86
           D  VF  AATLD+FRHDH ++ WM R+LA THR   L  +L F+  NPCPCS GIFSC  
Sbjct: 96  DFAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFHDLYRLLSFVAANPCPCSSGIFSCPE 155

Query: 85  TEPIFRFAINSFCNVGRFDDAVHAFDNM 2
            EPIFR AI+++C  G+ D A+ AFD M
Sbjct: 156 LEPIFRSAIDAYCRAGKMDYALLAFDTM 183


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