BLASTX nr result

ID: Atractylodes21_contig00030326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030326
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524567.1| cell cycle regulatory protein, putative [Ric...   142   5e-32
ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
emb|CBI28495.3| unnamed protein product [Vitis vinifera]              138   6e-31
ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein lig...   138   6e-31
gb|AFK37461.1| unknown [Lotus japonicus]                              135   6e-30

>ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis]
           gi|223536120|gb|EEF37775.1| cell cycle regulatory
           protein, putative [Ricinus communis]
          Length = 441

 Score =  142 bits (357), Expect = 5e-32
 Identities = 74/138 (53%), Positives = 88/138 (63%)
 Frame = +1

Query: 1   HSLAICEMQSADGIGGTKGIYSWGWNQNSQLGREGPEDLPLLVHGLLEEKPLSVSGGRVH 180
           HSLAIC   S+D  G  + I SWGWNQ+SQLGR GPE +PL + GL  E P+SVSGGRVH
Sbjct: 323 HSLAICRAASSDAEGDARNIVSWGWNQSSQLGRLGPEGIPLEIEGLAGEIPVSVSGGRVH 382

Query: 181 SLALTSDGEVFAWGXXXXXXXXXXXXXXXXXXXXXVFAWGCGRNGRLGLGSSINEPEPML 360
           S+ALTS GE                          V+ WGCG+NGRLGLGSS +E EP+L
Sbjct: 383 SIALTSKGE--------------------------VWVWGCGKNGRLGLGSSSDEAEPIL 416

Query: 361 VELSEGAKVLQAVSGFDH 414
           ++  EG +VLQ VSGFDH
Sbjct: 417 LDSLEGYEVLQIVSGFDH 434


>ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|222861317|gb|EEE98859.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/138 (51%), Positives = 89/138 (64%)
 Frame = +1

Query: 1   HSLAICEMQSADGIGGTKGIYSWGWNQNSQLGREGPEDLPLLVHGLLEEKPLSVSGGRVH 180
           HSLAIC+ +S +G G    I SWGWNQ+SQLGR GPE++P+ V GL  E  + VSGGRVH
Sbjct: 295 HSLAICQAKSPEGKGDATSIVSWGWNQSSQLGRPGPENVPMEVEGLAGETAILVSGGRVH 354

Query: 181 SLALTSDGEVFAWGXXXXXXXXXXXXXXXXXXXXXVFAWGCGRNGRLGLGSSINEPEPML 360
           S+A+TS GE                          V+ WGCGRNGRLG+GSS +E EP++
Sbjct: 355 SIAVTSKGE--------------------------VWVWGCGRNGRLGIGSSCDEAEPIM 388

Query: 361 VELSEGAKVLQAVSGFDH 414
           ++  EG +VLQAVSGFDH
Sbjct: 389 LDSLEGCEVLQAVSGFDH 406


>emb|CBI28495.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score =  138 bits (348), Expect = 6e-31
 Identities = 71/138 (51%), Positives = 86/138 (62%)
 Frame = +1

Query: 1   HSLAICEMQSADGIGGTKGIYSWGWNQNSQLGREGPEDLPLLVHGLLEEKPLSVSGGRVH 180
           HSLAIC+++S++ IGG   I SWGWNQ  QLGR GP   PL V GL  E P++VSGGR H
Sbjct: 308 HSLAICQVESSEAIGGATSIISWGWNQFFQLGRAGPGSCPLAVKGLAGETPVAVSGGRAH 367

Query: 181 SLALTSDGEVFAWGXXXXXXXXXXXXXXXXXXXXXVFAWGCGRNGRLGLGSSINEPEPML 360
           S+ALTS GE                          V+ WGCG++GRLGLGSS +E EP L
Sbjct: 368 SIALTSKGE--------------------------VWVWGCGKSGRLGLGSSTDEVEPSL 401

Query: 361 VELSEGAKVLQAVSGFDH 414
           +E  EG++VLQ  SGFDH
Sbjct: 402 LEYLEGSEVLQVASGFDH 419


>ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 432

 Score =  138 bits (348), Expect = 6e-31
 Identities = 71/138 (51%), Positives = 86/138 (62%)
 Frame = +1

Query: 1   HSLAICEMQSADGIGGTKGIYSWGWNQNSQLGREGPEDLPLLVHGLLEEKPLSVSGGRVH 180
           HSLAIC+++S++ IGG   I SWGWNQ  QLGR GP   PL V GL  E P++VSGGR H
Sbjct: 314 HSLAICQVESSEAIGGATSIISWGWNQFFQLGRAGPGSCPLAVKGLAGETPVAVSGGRAH 373

Query: 181 SLALTSDGEVFAWGXXXXXXXXXXXXXXXXXXXXXVFAWGCGRNGRLGLGSSINEPEPML 360
           S+ALTS GE                          V+ WGCG++GRLGLGSS +E EP L
Sbjct: 374 SIALTSKGE--------------------------VWVWGCGKSGRLGLGSSTDEVEPSL 407

Query: 361 VELSEGAKVLQAVSGFDH 414
           +E  EG++VLQ  SGFDH
Sbjct: 408 LEYLEGSEVLQVASGFDH 425


>gb|AFK37461.1| unknown [Lotus japonicus]
          Length = 433

 Score =  135 bits (339), Expect = 6e-30
 Identities = 70/138 (50%), Positives = 88/138 (63%)
 Frame = +1

Query: 1   HSLAICEMQSADGIGGTKGIYSWGWNQNSQLGREGPEDLPLLVHGLLEEKPLSVSGGRVH 180
           HSLAICE+  +D   GT  I SWGWNQ+SQLGR GP +LP L+  L  E P+SVSGGRVH
Sbjct: 315 HSLAICELDESDSSVGTTNIASWGWNQSSQLGRTGPGNLPSLIDALDGENPVSVSGGRVH 374

Query: 181 SLALTSDGEVFAWGXXXXXXXXXXXXXXXXXXXXXVFAWGCGRNGRLGLGSSINEPEPML 360
           S+ALT+ GE                          ++ WG G+NGRLGL SS++E EP+L
Sbjct: 375 SVALTAKGE--------------------------MWVWGSGKNGRLGLASSVDEFEPIL 408

Query: 361 VELSEGAKVLQAVSGFDH 414
           ++  EG ++LQAVSGFDH
Sbjct: 409 LDTLEGFQILQAVSGFDH 426


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