BLASTX nr result

ID: Atractylodes21_contig00030250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030250
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|2...   198   4e-49
ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [V...   196   2e-48
ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-li...   195   4e-48
ref|XP_004160536.1| PREDICTED: peptide chain release factor 1-li...   194   6e-48
ref|NP_001068394.1| Os11g0657100 [Oryza sativa Japonica Group] g...   191   5e-47

>ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|222861802|gb|EEE99344.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  198 bits (504), Expect = 4e-49
 Identities = 103/178 (57%), Positives = 132/178 (74%), Gaps = 7/178 (3%)
 Frame = -1

Query: 515 MTTPRSIASISSQISPRI-------ELPTRFLSVRPLQNQKSLTRIVCMAEPYLLKKLES 357
           M    +  S+++++SP I       + P+R   +RP  ++ +  RIVCMAEPYL+ KLES
Sbjct: 1   MNNSLATTSLTARMSPTIPHPHHFRQTPSRIFFLRPTLSRSTTPRIVCMAEPYLITKLES 60

Query: 356 AEKTWKELSVKLADPDVVSNPSEYQKLAQSMSELDQVVATYRGFKDCEKQLEESKVLSKE 177
           AEKTWKELSVKL DPDVVSNPSEYQKLAQS++ELD+VV+ ++ FKDCEK LE+++ L+KE
Sbjct: 61  AEKTWKELSVKLGDPDVVSNPSEYQKLAQSVAELDEVVSIFKRFKDCEKMLEDTRALAKE 120

Query: 176 ADSDXXXXXXXXXXXXSLSNQLKVFEEKLKMLLIPSDPLDARNILLEVRAGTGGEEAG 3
             +D            SLS++LK  EEKL +LL+PSDPLDARNILLEVRAGTGG+EAG
Sbjct: 121 DGNDEDMAEMIAYEIESLSSELKQLEEKLTVLLLPSDPLDARNILLEVRAGTGGDEAG 178


>ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
           gi|296086617|emb|CBI32252.3| unnamed protein product
           [Vitis vinifera]
          Length = 411

 Score =  196 bits (498), Expect = 2e-48
 Identities = 100/148 (67%), Positives = 119/148 (80%)
 Frame = -1

Query: 446 FLSVRPLQNQKSLTRIVCMAEPYLLKKLESAEKTWKELSVKLADPDVVSNPSEYQKLAQS 267
           F   RP +  ++  RIVCMAEPYL+ KLESAEKTWKELSVKLADPD+VSNPSEYQKLAQS
Sbjct: 27  FALFRPSRTHRT-PRIVCMAEPYLITKLESAEKTWKELSVKLADPDIVSNPSEYQKLAQS 85

Query: 266 MSELDQVVATYRGFKDCEKQLEESKVLSKEADSDXXXXXXXXXXXXSLSNQLKVFEEKLK 87
           M+ELD+VV+T++ FKDCEKQLEE+K L+KE   D            +L+NQLK  EE +K
Sbjct: 86  MAELDEVVSTFKRFKDCEKQLEEAKALAKEDGIDADMAEMIAYEIGTLTNQLKELEENIK 145

Query: 86  MLLIPSDPLDARNILLEVRAGTGGEEAG 3
           +LL+PSDPLD+RNILLEVRAGTGG+EAG
Sbjct: 146 VLLLPSDPLDSRNILLEVRAGTGGDEAG 173


>ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 429

 Score =  195 bits (495), Expect = 4e-48
 Identities = 102/157 (64%), Positives = 120/157 (76%), Gaps = 5/157 (3%)
 Frame = -1

Query: 458 LPTRFLSVRPLQNQKSLT-----RIVCMAEPYLLKKLESAEKTWKELSVKLADPDVVSNP 294
           LP R  S+ P   ++  T     RIVCMAEPYL+ KLESAEKTWKELSVKLADPDVVS+P
Sbjct: 35  LPIRHRSLHPFTTRRVATKLTPPRIVCMAEPYLITKLESAEKTWKELSVKLADPDVVSDP 94

Query: 293 SEYQKLAQSMSELDQVVATYRGFKDCEKQLEESKVLSKEADSDXXXXXXXXXXXXSLSNQ 114
            EYQKLAQS+SELD+VV+TYR FKDCEK LEE+K L+K+  +D            +LS Q
Sbjct: 95  KEYQKLAQSVSELDEVVSTYRRFKDCEKVLEETKALAKDDGNDEDMVEMISFEIDTLSKQ 154

Query: 113 LKVFEEKLKMLLIPSDPLDARNILLEVRAGTGGEEAG 3
           L   EEK+K+LL+PSDP+DARNILLEVRAGTGG+EAG
Sbjct: 155 LAELEEKIKVLLLPSDPMDARNILLEVRAGTGGDEAG 191


>ref|XP_004160536.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
          Length = 416

 Score =  194 bits (494), Expect = 6e-48
 Identities = 96/133 (72%), Positives = 115/133 (86%)
 Frame = -1

Query: 401 IVCMAEPYLLKKLESAEKTWKELSVKLADPDVVSNPSEYQKLAQSMSELDQVVATYRGFK 222
           ++CMAEPYL+ KLESAEKTWKELSVKLADPD+VSNP+EYQKLAQSMSELD+VV+T+R FK
Sbjct: 46  LICMAEPYLIVKLESAEKTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRKFK 105

Query: 221 DCEKQLEESKVLSKEADSDXXXXXXXXXXXXSLSNQLKVFEEKLKMLLIPSDPLDARNIL 42
           +CEKQLEE+K LSKE+ +D            SLS++LK  EEKLK++L+PSDPLDARNI+
Sbjct: 106 ECEKQLEEAKALSKESGNDEDMVEMIALEISSLSSELKDIEEKLKVMLLPSDPLDARNIM 165

Query: 41  LEVRAGTGGEEAG 3
           LEVRAGTGG+EAG
Sbjct: 166 LEVRAGTGGDEAG 178


>ref|NP_001068394.1| Os11g0657100 [Oryza sativa Japonica Group]
           gi|77552370|gb|ABA95167.1| Peptide chain release factor
           1, putative, expressed [Oryza sativa Japonica Group]
           gi|113645616|dbj|BAF28757.1| Os11g0657100 [Oryza sativa
           Japonica Group] gi|215686469|dbj|BAG87730.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215694739|dbj|BAG89930.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218186139|gb|EEC68566.1| hypothetical protein
           OsI_36894 [Oryza sativa Indica Group]
           gi|222616368|gb|EEE52500.1| hypothetical protein
           OsJ_34701 [Oryza sativa Japonica Group]
          Length = 416

 Score =  191 bits (486), Expect = 5e-47
 Identities = 97/150 (64%), Positives = 118/150 (78%)
 Frame = -1

Query: 452 TRFLSVRPLQNQKSLTRIVCMAEPYLLKKLESAEKTWKELSVKLADPDVVSNPSEYQKLA 273
           T F S    + +   + +VCMAEPYL+ KL+SAEK WKE+SV+LADPD+VS+PSEYQKLA
Sbjct: 29  TSFFSGGRRRRRLLSSSVVCMAEPYLIAKLDSAEKAWKEMSVRLADPDIVSDPSEYQKLA 88

Query: 272 QSMSELDQVVATYRGFKDCEKQLEESKVLSKEADSDXXXXXXXXXXXXSLSNQLKVFEEK 93
           QS++ELDQVV+TYR FKDCEKQ+EE+KVL KE + D            SLSNQL+  EEK
Sbjct: 89  QSVAELDQVVSTYRQFKDCEKQIEETKVLQKENEDDPDMAEMIDSEMESLSNQLEELEEK 148

Query: 92  LKMLLIPSDPLDARNILLEVRAGTGGEEAG 3
           LK+LL+P+DPLDARNILLEVRAG GG+EAG
Sbjct: 149 LKLLLLPNDPLDARNILLEVRAGAGGDEAG 178


Top