BLASTX nr result

ID: Atractylodes21_contig00030249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030249
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279458.1| PREDICTED: F-box protein At4g18380-like [Vit...   139   1e-30
ref|XP_002275356.1| PREDICTED: F-box protein At4g18380 [Vitis vi...   118   2e-24
ref|XP_002313372.1| f-box family protein [Populus trichocarpa] g...   114   4e-23
ref|XP_002531125.1| conserved hypothetical protein [Ricinus comm...   113   7e-23
ref|XP_004154648.1| PREDICTED: F-box protein At4g18380-like [Cuc...   100   7e-19

>ref|XP_002279458.1| PREDICTED: F-box protein At4g18380-like [Vitis vinifera]
          Length = 341

 Score =  139 bits (351), Expect = 1e-30
 Identities = 97/300 (32%), Positives = 159/300 (53%), Gaps = 32/300 (10%)
 Frame = -1

Query: 976 HINRLPDELLFLIFSKLNDARSLCICNLVSKRFSAVVRQTPSIFFTFP-NRHSNDRNENF 800
           H +RL DEL+ LIF+K+ DA+SLC C++VSKRF++++ QT ++    P + +S  +   F
Sbjct: 10  HFDRLSDELVTLIFNKVLDAKSLCRCSVVSKRFASLIPQTDNVSLIVPSSNNSKPKRGTF 69

Query: 799 PKKLLNYLSKSFSKKP------------PANKFDGALFKSTVDSLSRFQNVRNLRIELPS 656
               L YL   F  KP              N  +   ++ T + L  F N++ L I+LP 
Sbjct: 70  FIVFLKYLVGKFITKPLQFLYQTVVPKLSVNSDEDETYQFTTEVLRNFINIKRLSIQLPC 129

Query: 655 FQQD------ESIIKWHAEFGRDLNLCVFLFATSLHLTS---SSNQIQIQNPDTLLTNQL 503
              +      +  ++W AEFGR+L  CV L ATS H +S   SS++   Q  + +     
Sbjct: 130 HGDELGSKGTDYFLRWKAEFGRELESCVVLGATSFHRSSSTPSSHKKHKQLHEPMSATDE 189

Query: 502 LQSRITSANQCFREATWRHHVLRHVVENHRQTLDAAEICDSSQRGRVVVRGKQQLMDL-- 329
           L++R+         A+ RH +L+ ++ +      +  I DSS++GR+++ G++Q  +L  
Sbjct: 190 LKTRVVWMISSLIAASTRHWLLKQIIADIPMNPQSVMISDSSKQGRLIM-GEEQFKELRR 248

Query: 328 -LDP----EVKLPASGYGKLWHVQLLRLPESCRVLQGVSVVAIR---RTGEHEEEDEDVG 173
            ++P    E  +  +   KLWHV +L LP S RV+ G +++ IR   RT + E EDE +G
Sbjct: 249 SMNPTAPVERTMVPAVRVKLWHVPVLELPASGRVMNGATLIVIRPAERTMKMESEDEGLG 308


>ref|XP_002275356.1| PREDICTED: F-box protein At4g18380 [Vitis vinifera]
           gi|296083830|emb|CBI24218.3| unnamed protein product
           [Vitis vinifera]
          Length = 342

 Score =  118 bits (296), Expect = 2e-24
 Identities = 98/329 (29%), Positives = 157/329 (47%), Gaps = 31/329 (9%)
 Frame = -1

Query: 976 HINRLPDELLFLIFSKLNDARSLCICNLVSKRFSAVVRQTPSIFFTFPNRHSNDRN---- 809
           H + L DELL LIFSK+ DA SLC C+ VSKRF++++    ++  T P   S        
Sbjct: 10  HFDGLSDELLSLIFSKVLDAESLCRCSAVSKRFASLIPLVDAVLLTIPPPKSKPNRGLFL 69

Query: 808 --------ENFPKKLLNYLSKSFSKKPPA--NKFDGALFKSTVDSLSRFQNVRNLRIELP 659
                    NF  KLL +L +    +     +  +G++   + + L  F ++ +L I+LP
Sbjct: 70  NFGNSLQVTNFIAKLLQFLHQIVLPQSSVSFHSNEGSIHHFSSEVLKNFSHITSLHIQLP 129

Query: 658 SFQQD------ESIIKWHAEFGRDLNLCVFLFATSLHLTSSSNQI---QIQNPDTLLTNQ 506
           S   +       S++KW AEFGR+L  CV L AT    ++  ++I   Q +  ++ L   
Sbjct: 130 SHGGELGANGTGSLLKWEAEFGRELESCVVLGATYFERSNKISRIPKRQDRLHESSLATD 189

Query: 505 LLQSRITSANQCFREATWRHHVLRHVVENHRQTLDAAEICDSSQRGRVVVRGKQQLMDLL 326
            L+ R+     C   A+ RH +L+ ++ ++   L +  I D S++GR+ + G+ Q  +L 
Sbjct: 190 ELKLRVAWMISCLFAASARHCLLKQIIADNPMMLRSLVIEDGSKQGRLRM-GEDQFKELR 248

Query: 325 D--------PEVKLPASGYGKLWHVQLLRLPESCRVLQGVSVVAIRRTGEHEEEDEDVGL 170
                       KLPA    KLW+V LL LP S  V++G +++ IR   +  +   D  L
Sbjct: 249 KCVNTRPPLERTKLPAICI-KLWYVPLLELPASGCVMKGATLIVIRPLNQVMKMKSDGDL 307

Query: 169 KGLMEKGYEMDEEFLLWEVLTHIFEHHSP 83
                 G E  E   L E +  I +   P
Sbjct: 308 LAGAFDGEE--EAEALCEAVREILKEKKP 334


>ref|XP_002313372.1| f-box family protein [Populus trichocarpa]
           gi|222849780|gb|EEE87327.1| f-box family protein
           [Populus trichocarpa]
          Length = 361

 Score =  114 bits (285), Expect = 4e-23
 Identities = 83/288 (28%), Positives = 148/288 (51%), Gaps = 35/288 (12%)
 Frame = -1

Query: 970 NRLPDELLFLIFSKLNDARSLCICNLVSKRFSAVVRQTPSIFFTFPNRHSNDR--NENFP 797
           +RLPD LL +IF+K+ DA+SL  C  VSKRF+++V +  ++F + P R  N +  N +  
Sbjct: 29  DRLPDALLLVIFNKVGDAKSLTRCISVSKRFASLVFEADTVFLSIPPRKHNPKADNRSLR 88

Query: 796 KKLLNYLSKSFSKKP-------PANKFD----GALFKSTVDSLSRFQNVRNLRIELPS-- 656
           + L   L  +   KP        A++ D       F S  + L  FQ  + + +ELPS  
Sbjct: 89  RNLFKILISTLIAKPLHFFHRFIADRSDTDRKTVSFYSPKEVLKHFQQAKTMHMELPSDG 148

Query: 655 ----FQQDESIIKWHAEFGRDLNLCVFLFATSL--HLTSSSNQIQIQNPDTLLTNQLLQS 494
                + ++S+IKW A FG ++   V L ATS    +   S+    +N   +LT+  ++ 
Sbjct: 149 GMTGLEGNDSLIKWKARFGSEIKNFVILSATSFQKRMQPLSSDEFSENNGEVLTDGQMKL 208

Query: 493 RITSANQCFREATWRHHVLRHVVENHR--QTLDAAEICDSSQRGRVVVRGKQQLMDLLDP 320
           +I     C   A+ RH++++ V+E H   + + A+++C   ++GRV + GK ++ ++ + 
Sbjct: 209 QIVQTIYCLLAASARHYLMKQVLEEHHALENIIASDVC---KQGRVCM-GKDEVAEIRNS 264

Query: 319 EVKLPASGYG------------KLWHVQLLRLPESCRVLQGVSVVAIR 212
              + AS               KLW+V +L LPE+  +++G ++  +R
Sbjct: 265 MKSMVASTDSSLERTRVPDLSMKLWYVPVLELPENGYIMRGATLAVLR 312


>ref|XP_002531125.1| conserved hypothetical protein [Ricinus communis]
           gi|223529289|gb|EEF31259.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 356

 Score =  113 bits (283), Expect = 7e-23
 Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 48/310 (15%)
 Frame = -1

Query: 964 LPDELLFLIFSKLNDARSLCICNLVSKRFSAVVRQTPSIFFTFPN---RHSNDRNENFPK 794
           LPD LL LIF+KL D+RSL  C LVSKRFS++V Q  ++F + P    + ++       +
Sbjct: 18  LPDSLLLLIFNKLCDSRSLAQCLLVSKRFSSLVFQADNVFLSIPTPKPKSASSHRNRASR 77

Query: 793 KLLNYLSKSFSKKP-------PANKFDG----ALFKSTVDSLSRFQNVRNLRIELP---- 659
            LL  L   F  KP        A K  G      + S  + L  F+NV++L I++P    
Sbjct: 78  NLLRTLVHKFIAKPLQFFPCVAAPKSPGNSGCISYYSPNEVLKHFKNVKSLHIKVPFQCE 137

Query: 658 --SFQQDESIIKWHAEFGRDLNLCVFLFATSLHLTSSSNQIQIQNPD---------TLLT 512
               +   S++KW AEF  +L  CV L ATS+    + N   I + +          +L 
Sbjct: 138 KIGLECSNSLLKWQAEFSGELKNCVVLSATSIQ-ECNKNHCCINHVEEGGGGGTVGQILN 196

Query: 511 NQLLQSRITSANQCFREATWRHHVLRHVVENHRQTLDAAEICDSSQRGRVVVRGKQQLMD 332
           +  L+ RI +   C   A+ RH +L+ ++  H   L+   I D +++GR+ V GK Q+++
Sbjct: 197 DDELKLRIVTTISCLIAASARHLLLKQILAEHHM-LENVTISDVNKQGRLCV-GKDQIVE 254

Query: 331 LLDPEVKLPASGYG-------------KLWHVQLLRLPESCRVLQGVSVVAIR------R 209
           + +    L  S                KLW+V +L LP +  +++G ++V I+      R
Sbjct: 255 MRNAMKSLAVSESSSSIERTPVPDLSMKLWYVPVLELPATGYLMKGATLVVIKPVNGVTR 314

Query: 208 TGEHEEEDED 179
            G ++ +  D
Sbjct: 315 KGSNQSDSFD 324


>ref|XP_004154648.1| PREDICTED: F-box protein At4g18380-like [Cucumis sativus]
          Length = 354

 Score =  100 bits (249), Expect = 7e-19
 Identities = 93/323 (28%), Positives = 154/323 (47%), Gaps = 45/323 (13%)
 Frame = -1

Query: 964 LPDELLFLIFSKLNDARSLCICNLVSKRFSAVVRQTPSIFFTFPN--RHSNDRNENFPKK 791
           LPD +L LIF+KL  A SL  C  VSKRF++++ Q+ S+F + P      N ++   P+ 
Sbjct: 15  LPDSILHLIFTKLTHAPSLIRCLAVSKRFASLIPQSDSVFLSIPPLLLTPNPKSRTTPRS 74

Query: 790 LLNYLSKSFSKKPPANKFDGALFKSTVDSLSRF--------------QNVRNLRIELP-- 659
              +L K F       +F   L   T  S  RF              +  ++L I+LP  
Sbjct: 75  PTFFLRKFFFN---PFRFIRRLITHTSQSTPRFTDWYYWPSVALKELKGFKSLHIQLPCC 131

Query: 658 -----SFQQDESIIKWHAEFGRDLNLCVFLFATSLH----LTSSSNQIQIQNPDTLLTNQ 506
                S     +++KW AEFG +L  CV L A+SL     + S S+ ++ +  +  L  +
Sbjct: 132 GDEIGSNHNGGALLKWKAEFGSELKTCVVLGASSLRRKSVVESESSAVKEETEENRLHAE 191

Query: 505 L--------LQSRITSANQCFREATWRHHVLRHVVENHRQTLDAAEICDSSQRGRVVVRG 350
                    L+SRI         A+ RH++++ +V N    L    I DS+++GR+ +  
Sbjct: 192 SESEMGDGELKSRIVWTISSLIAASMRHYLVKQMV-NDFPLLKTVLITDSAKQGRLCME- 249

Query: 349 KQQLMDLLDPEVKLPASGY----------GKLWHVQLLRLPESCRVLQGVSVVAIRRTGE 200
           ++++M+L +  ++L +S Y           K+W+V +L LPE+  V+   ++V I+ +G 
Sbjct: 250 EEEVMELRE-SMQLSSSSYVERSVIPDLKMKMWYVPVLDLPEAGFVMTAATLVVIKPSG- 307

Query: 199 HEEEDEDVGLKGLMEKGYEMDEE 131
                  +GL GL   G E D E
Sbjct: 308 -----GGMGLDGLERIGDEFDSE 325


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