BLASTX nr result

ID: Atractylodes21_contig00030213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030213
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    57   7e-08
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]    57   3e-07
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]    57   3e-07
emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]    57   3e-07
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...    59   5e-07

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 57.4 bits (137), Expect(2) = 7e-08
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +3

Query: 30   LFSIHGIEFLMSSAYHPKTDGQTEVVNKCLETYLR 134
            LF + G +  MS AYHP+TDGQTEVVN+CLETYLR
Sbjct: 1013 LFKLQGTKLKMSIAYHPETDGQTEVVNRCLETYLR 1047



 Score = 23.9 bits (50), Expect(2) = 7e-08
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 1    PIFLSQFWKGSFPSMG 48
            PIF+S FWK  F   G
Sbjct: 1003 PIFMSNFWKELFKLQG 1018


>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
          Length = 1412

 Score = 57.0 bits (136), Expect(2) = 3e-07
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = +3

Query: 33   FSIHGIEFLMSSAYHPKTDGQTEVVNKCLETYLRGM 140
            F + G+   +S+AYHP+TDGQTEVVN+C+ETYLR M
Sbjct: 1171 FKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCM 1206



 Score = 22.3 bits (46), Expect(2) = 3e-07
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 1    PIFLSQFWKGSFPSMGLS 54
            PIF S FW+  F   G+S
Sbjct: 1160 PIFTSVFWQEFFKLQGVS 1177


>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
          Length = 1371

 Score = 57.0 bits (136), Expect(2) = 3e-07
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = +3

Query: 33   FSIHGIEFLMSSAYHPKTDGQTEVVNKCLETYLRGM 140
            F + G+   +S+AYHP+TDGQTEVVN+C+ETYLR M
Sbjct: 1196 FKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCM 1231



 Score = 22.3 bits (46), Expect(2) = 3e-07
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 1    PIFLSQFWKGSFPSMGLS 54
            PIF S FW+  F   G+S
Sbjct: 1185 PIFTSVFWQEFFKLQGVS 1202


>emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]
          Length = 672

 Score = 57.0 bits (136), Expect(2) = 3e-07
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = +3

Query: 33  FSIHGIEFLMSSAYHPKTDGQTEVVNKCLETYLRGM 140
           F + G+   +S+AYHP+TDGQTEVVN+C+ETYLR M
Sbjct: 334 FKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCM 369



 Score = 22.3 bits (46), Expect(2) = 3e-07
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 1   PIFLSQFWKGSFPSMGLS 54
           PIF S FW+  F   G+S
Sbjct: 323 PIFTSVFWQEFFKLQGVS 340


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = +3

Query: 33   FSIHGIEFLMSSAYHPKTDGQTEVVNKCLETYLRGM 140
            F + G+E  MSSAYHP++DGQTEVVN+CLE YLR M
Sbjct: 1204 FKLQGVELRMSSAYHPQSDGQTEVVNRCLENYLRCM 1239


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