BLASTX nr result

ID: Atractylodes21_contig00030172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030172
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525921.1| conserved hypothetical protein [Ricinus comm...    44   9e-11
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    41   8e-10
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    43   2e-08
ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    42   7e-08
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    40   1e-07

>ref|XP_002525921.1| conserved hypothetical protein [Ricinus communis]
           gi|223534750|gb|EEF36441.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score = 43.5 bits (101), Expect(3) = 9e-11
 Identities = 23/53 (43%), Positives = 31/53 (58%)
 Frame = -3

Query: 438 LKEALSWIKRKQWKDVEVETDSLVVIQALRCDFPMISDFGLIIQDCKNLCSEM 280
           ++EALSWIK   W  V ++ DSL V  AL  D      FGLII  CK++ + +
Sbjct: 111 VREALSWIKHMNWSRVSIDMDSLGVCVALTSD---NLSFGLIIDGCKHVVANI 160



 Score = 40.0 bits (92), Expect(3) = 9e-11
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = -2

Query: 688 WHKPTRNSIKVNIDAAIFANQGRFAFCGIARDHAGQFAGMKRDSRLGVVEPALAEAV 518
           W KP    +K+N DA IF  Q R  +  + R+HA      +     GV E  LAEA+
Sbjct: 53  WRKPHNEYLKINEDAGIFQAQNRTGYGMVVRNHAANLVAARALIIHGVYEANLAEAM 109



 Score = 28.5 bits (62), Expect(3) = 9e-11
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -1

Query: 167 IRRPANMCAHNIARASCSFS 108
           IRR  N CAH +ARAS S S
Sbjct: 168 IRRSTNHCAHMLARASVSLS 187


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 41.2 bits (95), Expect(3) = 8e-10
 Identities = 22/59 (37%), Positives = 31/59 (52%)
 Frame = -2

Query: 691 KWHKPTRNSIKVNIDAAIFANQGRFAFCGIARDHAGQFAGMKRDSRLGVVEPALAEAVG 515
           KW KP    IK+N+D A+F ++G  A   + RDH G+F G           P + EA+G
Sbjct: 663 KWQKPDYGWIKINVDGAVFPDKG--AIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALG 719



 Score = 38.5 bits (88), Expect(3) = 8e-10
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = -3

Query: 438 LKEALSWIKRKQWKDVEVETDSLVVIQALRCDFPMISDFGLIIQDCKNLCSEM 280
           ++E LSWI  +    + VETD L V+QA++      + FG II DC ++   +
Sbjct: 720 VREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHL 772



 Score = 28.9 bits (63), Expect(3) = 8e-10
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 182 VEVNFIRRPANMCAHNIARASCSFS 108
           V+V + RR AN  AH +A  +CSF+
Sbjct: 775 VQVVYARRSANSAAHCLANGACSFT 799


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 42.7 bits (99), Expect(3) = 2e-08
 Identities = 23/58 (39%), Positives = 28/58 (48%)
 Frame = -2

Query: 688 WHKPTRNSIKVNIDAAIFANQGRFAFCGIARDHAGQFAGMKRDSRLGVVEPALAEAVG 515
           W  P    +K N+DAAIF+ Q RF      RD  G+F     +   G   P  AEAVG
Sbjct: 57  WQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVG 114



 Score = 33.9 bits (76), Expect(3) = 2e-08
 Identities = 14/52 (26%), Positives = 32/52 (61%)
 Frame = -3

Query: 438 LKEALSWIKRKQWKDVEVETDSLVVIQALRCDFPMISDFGLIIQDCKNLCSE 283
           L++A+ W+ + +  +V++E D  +V+ ++       ++FG II DC++L  +
Sbjct: 115 LRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQ 166



 Score = 27.3 bits (59), Expect(3) = 2e-08
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -1

Query: 179 EVNFIRRPANMCAHNIARAS 120
           +++F+RR AN+ AH+ AR S
Sbjct: 171 KISFVRRQANVVAHSFARVS 190


>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 42.4 bits (98), Expect(2) = 7e-08
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = -2

Query: 688 WHKPTRNSIKVNIDAAIFANQGRFAFCGIARDHAGQFAGMKRDSRLGVVEPALAEAV 518
           W+ P+  S+KVN+DA IF+N        + +DHAG F      S  G   P +AE +
Sbjct: 28  WNTPSLGSMKVNMDATIFSNPDSMGVGCVMKDHAGLFVCAMAVSFAGAYIPEIAEGL 84



 Score = 40.4 bits (93), Expect(2) = 7e-08
 Identities = 22/53 (41%), Positives = 32/53 (60%)
 Frame = -3

Query: 438 LKEALSWIKRKQWKDVEVETDSLVVIQALRCDFPMISDFGLIIQDCKNLCSEM 280
           ++EALSW + +Q  +V  E D L +++AL       S  GLII+DCK L S +
Sbjct: 86  IQEALSWARDRQLLNVVFELDCLHIVEALLRKGTDRSSLGLIIKDCKLLSSSI 138


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 39.7 bits (91), Expect(3) = 1e-07
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = -2

Query: 679 PTRNSIKVNIDAAIFANQGRFAFCGIARDHAGQFAGMKRDSRLGVVEPALAEAVG 515
           P    +K N+D A+F   GR  F  + RD AG F      S  G+    LAEA+G
Sbjct: 171 PQPGFVKCNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIG 225



 Score = 32.3 bits (72), Expect(3) = 1e-07
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -3

Query: 438 LKEALSWIKRKQWKDVEVETDSLVVIQALRCDFPMISDFGLIIQDCKNL 292
           L+EA+ W+      +V  E D+ VV+ A+      + +FG +I DC+ L
Sbjct: 226 LREAVQWVLSLGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLL 274



 Score = 28.9 bits (63), Expect(3) = 1e-07
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = -1

Query: 176 VNFIRRPANMCAHNIARAS 120
           V FIR+ AN+ AH++ARAS
Sbjct: 283 VQFIRKQANLVAHSLARAS 301


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