BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030111
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    53   1e-14
emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera]    41   5e-06
emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]         45   6e-06

>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score = 52.8 bits (125), Expect(2) = 1e-14
 Identities = 21/37 (56%), Positives = 32/37 (86%)
 Frame = +2

Query: 188 LKKCKTCMLTKITKQHYPHVKRDSVMLELIHSNLCDL 298
           ++KC+TCMLTKI +Q +  ++R+S +LELIHS+LCD+
Sbjct: 428 IEKCRTCMLTKIIRQPFKSIERNSKVLELIHSDLCDI 464



 Score = 51.2 bits (121), Expect(2) = 1e-14
 Identities = 27/48 (56%), Positives = 33/48 (68%)
 Frame = +1

Query: 52  VSNSVSFARSNSVDFVLWHARLRHVNFKRMREMSKDGLI*PFDMISEK 195
           V NS+  A S+  D  LWHARL HV++K M EMSK+GLI  FD+  EK
Sbjct: 383 VVNSIYMACSSKNDTSLWHARLGHVHYKGMIEMSKEGLIPTFDVNIEK 430


>emb|CAN74721.1| hypothetical protein VITISV_006958 [Vitis vinifera]
          Length = 487

 Score = 41.2 bits (95), Expect(2) = 5e-06
 Identities = 15/36 (41%), Positives = 27/36 (75%)
 Frame = +2

Query: 191 KKCKTCMLTKITKQHYPHVKRDSVMLELIHSNLCDL 298
           +KC+ C+ +K  ++ +  ++R S +LEL+HS+LCDL
Sbjct: 228 QKCEICVESKFARKPFKSIERSSELLELVHSDLCDL 263



 Score = 33.9 bits (76), Expect(2) = 5e-06
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +1

Query: 100 LWHARLRHVNFKRMREMSKDGLI*PFDM 183
           LWH+RL HVN+  M +M+  GL+  FD+
Sbjct: 197 LWHSRLGHVNYHSMYKMANLGLLLKFDI 224


>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score = 44.7 bits (104), Expect(2) = 6e-06
 Identities = 19/37 (51%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
 Frame = +2

Query: 191 KKCKTCMLTKITKQHYPHV-KRDSVMLELIHSNLCDL 298
           +KC+TC+ +K TK+ +P V KR++ +LELIHS++C+L
Sbjct: 524 EKCETCVKSKFTKKPFPSVPKRNTSLLELIHSDICEL 560



 Score = 30.0 bits (66), Expect(2) = 6e-06
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 100 LWHARLRHVNFKRMREMSKDGLI 168
           LWH RL H N K + +M   GL+
Sbjct: 494 LWHKRLAHTNIKNIEKMQTKGLL 516