BLASTX nr result

ID: Atractylodes21_contig00030054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030054
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002876464.1| predicted protein [Arabidopsis lyrata subsp....    91   1e-16
emb|CBI29961.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation...    90   2e-16
gb|AAC83464.1| eIF3c [Arabidopsis thaliana]                            89   4e-16
ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arab...    89   4e-16

>ref|XP_002876464.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322302|gb|EFH52723.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 892

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 49/88 (55%), Positives = 64/88 (72%), Gaps = 4/88 (4%)
 Frame = -2

Query: 336 IGAVL*VHCCINKIW--WEMKKLLAQGVSQSRYREKSLE*ECY*RRRQMPYH--INLELL 169
           +G +   H C+++++    +++LLAQGVSQSRY EK+ E E   RRRQMPYH  INLELL
Sbjct: 543 VGMITEAHSCLSELYSGQRVRELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELL 602

Query: 168 EDVPLMCAMLMEVPNMDVHSHDARPKGI 85
           E V L+CAML+EVPNM  +SHD + K I
Sbjct: 603 EAVQLICAMLLEVPNMAANSHDVKRKVI 630


>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/88 (56%), Positives = 65/88 (73%), Gaps = 4/88 (4%)
 Frame = -2

Query: 336 IGAVL*VHCCINKIW--WEMKKLLAQGVSQSRYREKSLE*ECY*RRRQMPYH--INLELL 169
           +G +   H C+++++    +K+LLAQGVSQSRY EK+ E E   RRRQMPYH  INLELL
Sbjct: 495 VGLIAEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERIERRRQMPYHMHINLELL 554

Query: 168 EDVPLMCAMLMEVPNMDVHSHDARPKGI 85
           E V L+CAML+EVPNM  ++HDA+ K I
Sbjct: 555 EGVHLICAMLLEVPNMAANTHDAKRKVI 582


>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Vitis vinifera]
          Length = 946

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/88 (56%), Positives = 65/88 (73%), Gaps = 4/88 (4%)
 Frame = -2

Query: 336 IGAVL*VHCCINKIW--WEMKKLLAQGVSQSRYREKSLE*ECY*RRRQMPYH--INLELL 169
           +G +   H C+++++    +K+LLAQGVSQSRY EK+ E E   RRRQMPYH  INLELL
Sbjct: 575 VGLIAEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERIERRRQMPYHMHINLELL 634

Query: 168 EDVPLMCAMLMEVPNMDVHSHDARPKGI 85
           E V L+CAML+EVPNM  ++HDA+ K I
Sbjct: 635 EGVHLICAMLLEVPNMAANTHDAKRKVI 662


>gb|AAC83464.1| eIF3c [Arabidopsis thaliana]
          Length = 900

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/87 (55%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
 Frame = -2

Query: 333 GAVL*VHCCINKIWW--EMKKLLAQGVSQSRYREKSLE*ECY*RRRQMPY--HINLELLE 166
           G +   H C++++++   +++LLAQGVSQSRY EK+ E E   RRRQMPY  H+NLELLE
Sbjct: 555 GMITESHSCLSELYFGQRVRELLAQGVSQSRYHEKTPEQERMERRRQMPYHMHLNLELLE 614

Query: 165 DVPLMCAMLMEVPNMDVHSHDARPKGI 85
            V L+CAML+EVPNM  +SHDA+ + I
Sbjct: 615 AVHLICAMLLEVPNMAANSHDAKRRVI 641


>ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arabidopsis lyrata subsp.
           lyrata] gi|297323908|gb|EFH54329.1| hypothetical protein
           ARALYDRAFT_486056 [Arabidopsis lyrata subsp. lyrata]
          Length = 888

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/88 (54%), Positives = 65/88 (73%), Gaps = 4/88 (4%)
 Frame = -2

Query: 336 IGAVL*VHCCINKIW--WEMKKLLAQGVSQSRYREKSLE*ECY*RRRQMPY--HINLELL 169
           +G +   H C+++++    +++LLAQGVSQSRY EK+ E E   RRRQMPY  H+NLELL
Sbjct: 542 VGMITESHSCLSELYSGQRVRELLAQGVSQSRYHEKTPEQERMERRRQMPYHMHLNLELL 601

Query: 168 EDVPLMCAMLMEVPNMDVHSHDARPKGI 85
           E V L+CAML+EVPNM  +SHDA+ + I
Sbjct: 602 EAVHLICAMLLEVPNMAANSHDAKRRVI 629


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