BLASTX nr result

ID: Atractylodes21_contig00030051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030051
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]   109   2e-36
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha...   108   5e-36
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers...   108   5e-36
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]   105   2e-34
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]   105   2e-34

>gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]
          Length = 1141

 Score =  109 bits (273), Expect(2) = 2e-36
 Identities = 53/99 (53%), Positives = 63/99 (63%)
 Frame = +1

Query: 127 HMSTHKTVSLIKRLQLIARPFLMRCNLPXXXXXXXXXXXXXXXXXXPSAEHTHSPLQLVS 306
           H       S IKR+QLIARP LMR  LP                  PS+EH +SP QL++
Sbjct: 290 HTQNGLAESFIKRIQLIARPLLMRSRLPVAAWGHAVLHASELIRIRPSSEHKYSPSQLLT 349

Query: 307 EREPNLSHLKIFGCTVYVPIPPPQRTKMGPQRRLGIYIG 423
             EP++SHL+ FGC VYVPI PPQRTKMGPQRR+GIY+G
Sbjct: 350 GHEPDISHLRTFGCAVYVPIAPPQRTKMGPQRRMGIYVG 388



 Score = 67.8 bits (164), Expect(2) = 2e-36
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = +3

Query: 3   FPENQIKKKNIYIRKDNAARFTSQAFNDYCMSIGINVEHSVPHVHTQNG 149
           FP+  +K     IR DNA  FTSQAFNDYCMS+G++VEH V HVHTQNG
Sbjct: 250 FPDFPLKT----IRLDNAGEFTSQAFNDYCMSMGVSVEHPVAHVHTQNG 294


>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
          Length = 1123

 Score =  108 bits (270), Expect(2) = 5e-36
 Identities = 53/99 (53%), Positives = 62/99 (62%)
 Frame = +1

Query: 127 HMSTHKTVSLIKRLQLIARPFLMRCNLPXXXXXXXXXXXXXXXXXXPSAEHTHSPLQLVS 306
           H       S IKR+QLIARP LMR  LP                  PS+EH +SP QL+ 
Sbjct: 290 HTQNGLAESFIKRIQLIARPLLMRSRLPVAAWGHAVLHASELIRIRPSSEHKYSPSQLLI 349

Query: 307 EREPNLSHLKIFGCTVYVPIPPPQRTKMGPQRRLGIYIG 423
             EP++SHL+ FGC VYVPI PPQRTKMGPQRR+GIY+G
Sbjct: 350 GHEPDISHLRTFGCAVYVPIAPPQRTKMGPQRRMGIYVG 388



 Score = 67.8 bits (164), Expect(2) = 5e-36
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = +3

Query: 3   FPENQIKKKNIYIRKDNAARFTSQAFNDYCMSIGINVEHSVPHVHTQNG 149
           FP+  +K     IR DNA  FTSQAFNDYCMS+G++VEH V HVHTQNG
Sbjct: 250 FPDFPLKT----IRLDNAGEFTSQAFNDYCMSMGVSVEHPVAHVHTQNG 294


>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
          Length = 779

 Score =  108 bits (269), Expect(2) = 5e-36
 Identities = 55/99 (55%), Positives = 61/99 (61%)
 Frame = +1

Query: 127 HMSTHKTVSLIKRLQLIARPFLMRCNLPXXXXXXXXXXXXXXXXXXPSAEHTHSPLQLVS 306
           H       SLIKRLQLIARP LMR  L                   P+  H  SPLQL  
Sbjct: 57  HTQNGLAESLIKRLQLIARPLLMRTKLSVSMWGHAILHAATLVRIRPTNYHEFSPLQLTF 116

Query: 307 EREPNLSHLKIFGCTVYVPIPPPQRTKMGPQRRLGIYIG 423
            +EPN+SHL++FGC VYVPI PPQRTKMGPQRRLGIY+G
Sbjct: 117 GQEPNISHLRVFGCAVYVPIAPPQRTKMGPQRRLGIYVG 155



 Score = 68.2 bits (165), Expect(2) = 5e-36
 Identities = 34/49 (69%), Positives = 35/49 (71%)
 Frame = +3

Query: 3   FPENQIKKKNIYIRKDNAARFTSQAFNDYCMSIGINVEHSVPHVHTQNG 149
           FP+  IK     IR DNA  FTSQAFNDYCMS GI VEH V HVHTQNG
Sbjct: 17  FPDYTIKT----IRLDNAGEFTSQAFNDYCMSTGITVEHPVAHVHTQNG 61


>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
          Length = 1501

 Score =  105 bits (263), Expect(2) = 2e-34
 Identities = 52/99 (52%), Positives = 61/99 (61%)
 Frame = +1

Query: 127 HMSTHKTVSLIKRLQLIARPFLMRCNLPXXXXXXXXXXXXXXXXXXPSAEHTHSPLQLVS 306
           H       S IKRLQLIARP LM+  LP                  P+  H +SP QLV 
Sbjct: 625 HTQNGLAESFIKRLQLIARPLLMKTKLPTSAWGHATMHAAALVRVRPTTYHEYSPSQLVL 684

Query: 307 EREPNLSHLKIFGCTVYVPIPPPQRTKMGPQRRLGIYIG 423
            ++PN+SHL+IFGC VYVPI P QRTKMGPQRRLG+Y+G
Sbjct: 685 GKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRLGVYVG 723



 Score = 65.1 bits (157), Expect(2) = 2e-34
 Identities = 31/49 (63%), Positives = 34/49 (69%)
 Frame = +3

Query: 3   FPENQIKKKNIYIRKDNAARFTSQAFNDYCMSIGINVEHSVPHVHTQNG 149
           FP+  IK     IR DNA  FTSQ F DYCMS+GIN+EH V H HTQNG
Sbjct: 585 FPDYPIKT----IRLDNAGEFTSQTFIDYCMSVGINIEHPVAHTHTQNG 629


>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
          Length = 1496

 Score =  105 bits (263), Expect(2) = 2e-34
 Identities = 52/99 (52%), Positives = 61/99 (61%)
 Frame = +1

Query: 127 HMSTHKTVSLIKRLQLIARPFLMRCNLPXXXXXXXXXXXXXXXXXXPSAEHTHSPLQLVS 306
           H       S IKRLQLIARP LM+  LP                  P+  H +SP QLV 
Sbjct: 627 HTQNGLAESFIKRLQLIARPLLMKTKLPTSVWGHAIMHAAALVRIRPTTYHEYSPSQLVL 686

Query: 307 EREPNLSHLKIFGCTVYVPIPPPQRTKMGPQRRLGIYIG 423
            ++PN+SHL+IFGC VYVPI P QRTKMGPQRRLG+Y+G
Sbjct: 687 GKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRLGVYVG 725



 Score = 65.1 bits (157), Expect(2) = 2e-34
 Identities = 31/49 (63%), Positives = 34/49 (69%)
 Frame = +3

Query: 3   FPENQIKKKNIYIRKDNAARFTSQAFNDYCMSIGINVEHSVPHVHTQNG 149
           FP+  IK     IR DNA  FTSQ F DYCMS+GIN+EH V H HTQNG
Sbjct: 587 FPDYPIKT----IRLDNAGEFTSQTFIDYCMSVGINIEHPVAHTHTQNG 631


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