BLASTX nr result

ID: Atractylodes21_contig00030021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030021
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling co...   189   2e-46
ref|NP_001241294.1| chromatin structure-remodeling complex prote...   187   1e-45
ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling co...   186   1e-45
gb|ABF85669.1| SNF5 [Pisum sativum]                                   182   2e-44
gb|AFK36059.1| unknown [Lotus japonicus]                              179   2e-43

>ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling complex protein BSH
           [Vitis vinifera] gi|297736833|emb|CBI26034.3| unnamed
           protein product [Vitis vinifera]
          Length = 243

 Score =  189 bits (481), Expect = 2e-46
 Identities = 92/110 (83%), Positives = 102/110 (92%)
 Frame = +2

Query: 113 MKPHPAWGSLRSPVKFRIPTADNLVPIRLDIDIDGQRFRDTFTWNPSDPDSDVILFAKRT 292
           MKP P+  S ++PVKFR+PTADNLVPIRLDI+IDG RF+D FTWNPSDPDS+V++FAKRT
Sbjct: 1   MKPLPSTSS-KNPVKFRMPTADNLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRT 59

Query: 293 VKDLKLPPAFVTQIAQSIQSQLTEFRSFEGQDMYTGEKIVPIKLDLRVNH 442
           VKDLKLPPAF+TQIAQSIQSQL EFRSFEGQDM TGEKIVPIKLDLRVNH
Sbjct: 60  VKDLKLPPAFITQIAQSIQSQLAEFRSFEGQDMQTGEKIVPIKLDLRVNH 109


>ref|NP_001241294.1| chromatin structure-remodeling complex protein BSH-like [Glycine
           max] gi|296932945|gb|ADH93593.1| SNF5-type
           chromatin-remodeling complex protein [Glycine max]
           gi|297179845|gb|ADI23919.1| SNF5 [Glycine max]
          Length = 240

 Score =  187 bits (474), Expect = 1e-45
 Identities = 88/106 (83%), Positives = 100/106 (94%)
 Frame = +2

Query: 125 PAWGSLRSPVKFRIPTADNLVPIRLDIDIDGQRFRDTFTWNPSDPDSDVILFAKRTVKDL 304
           P  G  R+PVKFR+PTA+NLVPIRLDI+I+GQR++D FTWNPSDPDS+V++FAKRTVKDL
Sbjct: 4   PISGFYRNPVKFRMPTAENLVPIRLDIEIEGQRYKDAFTWNPSDPDSEVVVFAKRTVKDL 63

Query: 305 KLPPAFVTQIAQSIQSQLTEFRSFEGQDMYTGEKIVPIKLDLRVNH 442
           KLPPAFVTQIAQSIQSQL+EFRS+EGQDMY GEKIVPIKLDLRVNH
Sbjct: 64  KLPPAFVTQIAQSIQSQLSEFRSYEGQDMYAGEKIVPIKLDLRVNH 109


>ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling complex protein BSH-like
           [Cucumis sativus] gi|449498785|ref|XP_004160633.1|
           PREDICTED: chromatin structure-remodeling complex
           protein BSH-like [Cucumis sativus]
          Length = 240

 Score =  186 bits (473), Expect = 1e-45
 Identities = 87/100 (87%), Positives = 98/100 (98%)
 Frame = +2

Query: 143 RSPVKFRIPTADNLVPIRLDIDIDGQRFRDTFTWNPSDPDSDVILFAKRTVKDLKLPPAF 322
           ++P KFRIPTA+NLVPIRLDI+IDGQRF+D FTWNPSDPDS+V++FAKRTVKDLKLPPAF
Sbjct: 10  KAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF 69

Query: 323 VTQIAQSIQSQLTEFRSFEGQDMYTGEKIVPIKLDLRVNH 442
           +TQIAQSIQSQLTEFRSFEGQDMYTGEKI+PIKLDLRVN+
Sbjct: 70  ITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNN 109


>gb|ABF85669.1| SNF5 [Pisum sativum]
          Length = 240

 Score =  182 bits (462), Expect = 2e-44
 Identities = 84/106 (79%), Positives = 97/106 (91%)
 Frame = +2

Query: 125 PAWGSLRSPVKFRIPTADNLVPIRLDIDIDGQRFRDTFTWNPSDPDSDVILFAKRTVKDL 304
           P  G  R+PVKFR+PT++NLVP+RLDI+IDG R++D FTWNPSDPDS+V++FAKRTVKDL
Sbjct: 4   PISGFYRNPVKFRMPTSENLVPVRLDIEIDGHRYKDAFTWNPSDPDSEVVVFAKRTVKDL 63

Query: 305 KLPPAFVTQIAQSIQSQLTEFRSFEGQDMYTGEKIVPIKLDLRVNH 442
           KLPP FVTQIAQSIQSQL EFRS+EGQDMY GEKI+PIKLDLRVNH
Sbjct: 64  KLPPPFVTQIAQSIQSQLAEFRSYEGQDMYAGEKIIPIKLDLRVNH 109


>gb|AFK36059.1| unknown [Lotus japonicus]
          Length = 240

 Score =  179 bits (454), Expect = 2e-43
 Identities = 87/106 (82%), Positives = 96/106 (90%)
 Frame = +2

Query: 125 PAWGSLRSPVKFRIPTADNLVPIRLDIDIDGQRFRDTFTWNPSDPDSDVILFAKRTVKDL 304
           PA    R+PVKFR+PTA+NLVPIRLDI+ID QR++D FTWNPSDPDS+V +FAKRTVKDL
Sbjct: 4   PASIFYRNPVKFRMPTAENLVPIRLDIEIDAQRYKDAFTWNPSDPDSEVGVFAKRTVKDL 63

Query: 305 KLPPAFVTQIAQSIQSQLTEFRSFEGQDMYTGEKIVPIKLDLRVNH 442
           KLPP FVTQIAQSIQSQL EFRS+EGQDMY GEKIVPIKLDLRVNH
Sbjct: 64  KLPPPFVTQIAQSIQSQLAEFRSYEGQDMYAGEKIVPIKLDLRVNH 109


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