BLASTX nr result
ID: Atractylodes21_contig00030007
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00030007
(235 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containi... 129 2e-28
ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containi... 129 3e-28
ref|XP_002510663.1| pentatricopeptide repeat-containing protein,... 127 9e-28
ref|XP_002865541.1| pentatricopeptide repeat-containing protein ... 126 2e-27
ref|NP_199046.1| pentatricopeptide repeat-containing protein [Ar... 126 2e-27
>ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 129 bits (325), Expect = 2e-28
Identities = 63/78 (80%), Positives = 69/78 (88%)
Frame = +1
Query: 1 TYNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENM 180
TYNIMINS GEQE+W+ V+ LL KM+SQGL PNV+TYTTLVDIYG SGRF DA DCLE M
Sbjct: 528 TYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAM 587
Query: 181 KSAGLKPSATIYNALINA 234
KSAGLKPSAT+YNALINA
Sbjct: 588 KSAGLKPSATMYNALINA 605
Score = 58.5 bits (140), Expect = 5e-07
Identities = 23/77 (29%), Positives = 45/77 (58%)
Frame = +1
Query: 1 TYNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENM 180
TY ++++++ RWE R LLK+M+++ +QPN ++ ++ Y G + + L M
Sbjct: 388 TYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREM 447
Query: 181 KSAGLKPSATIYNALIN 231
K++ +KP YN +I+
Sbjct: 448 KNSNVKPDRHFYNVMID 464
Score = 58.2 bits (139), Expect = 7e-07
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +1
Query: 4 YNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENMK 183
YN+MI++FG+ + +M S+G++P+V+T+ TL+D + + G A + E M+
Sbjct: 459 YNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQ 518
Query: 184 SAGLKPSATIYNALINA 234
G P T YN +IN+
Sbjct: 519 ERGYLPCPTTYNIMINS 535
>ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product
[Vitis vinifera]
Length = 695
Score = 129 bits (323), Expect = 3e-28
Identities = 62/78 (79%), Positives = 70/78 (89%)
Frame = +1
Query: 1 TYNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENM 180
TYNIMINSFGEQERWE V++LL KM+SQGL NV+TYTTLVDIYG+SGRF DA +CLE M
Sbjct: 503 TYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVM 562
Query: 181 KSAGLKPSATIYNALINA 234
KS GLKPS+T+YNALINA
Sbjct: 563 KSVGLKPSSTMYNALINA 580
Score = 61.2 bits (147), Expect = 8e-08
Identities = 26/77 (33%), Positives = 47/77 (61%)
Frame = +1
Query: 4 YNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENMK 183
YN+MI++FG+ + + +M+ +G+QP+ +T+ TL+D + +SG A + E M+
Sbjct: 434 YNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQ 493
Query: 184 SAGLKPSATIYNALINA 234
+G P T YN +IN+
Sbjct: 494 ESGCSPCTTTYNIMINS 510
Score = 57.4 bits (137), Expect = 1e-06
Identities = 22/77 (28%), Positives = 47/77 (61%)
Frame = +1
Query: 1 TYNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENM 180
TY+++I+++ RWE R +LK+M++ G++PN ++ ++ Y G++ + L M
Sbjct: 363 TYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM 422
Query: 181 KSAGLKPSATIYNALIN 231
+++G+ P YN +I+
Sbjct: 423 RNSGVSPDRHFYNVMID 439
>ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551364|gb|EEF52850.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 695
Score = 127 bits (319), Expect = 9e-28
Identities = 58/78 (74%), Positives = 71/78 (91%)
Frame = +1
Query: 1 TYNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENM 180
T+NIMINSFGEQERW+ V++L+ M+S GL PNV+TYTTL+DIYG+SGRF DA +CLE+M
Sbjct: 503 TFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDM 562
Query: 181 KSAGLKPSATIYNALINA 234
KSAGLKPS+T+YNALINA
Sbjct: 563 KSAGLKPSSTMYNALINA 580
Score = 56.6 bits (135), Expect = 2e-06
Identities = 22/77 (28%), Positives = 46/77 (59%)
Frame = +1
Query: 1 TYNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENM 180
TY+++I+++ RWE R +LK+M++ + PN ++ ++ Y G + + L+ M
Sbjct: 363 TYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEM 422
Query: 181 KSAGLKPSATIYNALIN 231
K++G++P YN +I+
Sbjct: 423 KNSGVRPDRHFYNVMID 439
Score = 55.8 bits (133), Expect = 3e-06
Identities = 25/77 (32%), Positives = 43/77 (55%)
Frame = +1
Query: 4 YNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENMK 183
YN+MI++FG+ + KM S+G+QP+ +T+ TL+D + ++ A + E M
Sbjct: 434 YNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMM 493
Query: 184 SAGLKPSATIYNALINA 234
G P T +N +IN+
Sbjct: 494 EKGFSPCVTTFNIMINS 510
>ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297311376|gb|EFH41800.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 711
Score = 126 bits (316), Expect = 2e-27
Identities = 57/78 (73%), Positives = 70/78 (89%)
Frame = +1
Query: 1 TYNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENM 180
TYNIMINS+G+QERW+ ++ LL KMKSQG+ PNV+T+TTLVD+YG+SGRF DA +CLE M
Sbjct: 518 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 577
Query: 181 KSAGLKPSATIYNALINA 234
KS GLKPS+T+YNALINA
Sbjct: 578 KSVGLKPSSTMYNALINA 595
Score = 58.5 bits (140), Expect = 5e-07
Identities = 26/77 (33%), Positives = 48/77 (62%)
Frame = +1
Query: 4 YNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENMK 183
YN++I++FG+ + + +M S+G++P+ +T+ TL+D + + GR + A + E M+
Sbjct: 449 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 508
Query: 184 SAGLKPSATIYNALINA 234
G P AT YN +IN+
Sbjct: 509 RRGCLPCATTYNIMINS 525
Score = 57.4 bits (137), Expect = 1e-06
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +1
Query: 1 TYNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENM 180
TY+++I+++ RWE R +LK+M++ +QPN ++ L+ Y G + L+ M
Sbjct: 378 TYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEM 437
Query: 181 KSAGLKPSATIYNALIN 231
KS G+KP YN +I+
Sbjct: 438 KSIGVKPDRQFYNVVID 454
>ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like
[Arabidopsis thaliana] gi|332007411|gb|AED94794.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 709
Score = 126 bits (316), Expect = 2e-27
Identities = 57/78 (73%), Positives = 70/78 (89%)
Frame = +1
Query: 1 TYNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENM 180
TYNIMINS+G+QERW+ ++ LL KMKSQG+ PNV+T+TTLVD+YG+SGRF DA +CLE M
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Query: 181 KSAGLKPSATIYNALINA 234
KS GLKPS+T+YNALINA
Sbjct: 576 KSVGLKPSSTMYNALINA 593
Score = 58.5 bits (140), Expect = 5e-07
Identities = 26/77 (33%), Positives = 48/77 (62%)
Frame = +1
Query: 4 YNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENMK 183
YN++I++FG+ + + +M S+G++P+ +T+ TL+D + + GR + A + E M+
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 184 SAGLKPSATIYNALINA 234
G P AT YN +IN+
Sbjct: 507 RRGCLPCATTYNIMINS 523
Score = 55.8 bits (133), Expect = 3e-06
Identities = 25/77 (32%), Positives = 45/77 (58%)
Frame = +1
Query: 1 TYNIMINSFGEQERWEGVRSLLKKMKSQGLQPNVITYTTLVDIYGRSGRFMDATDCLENM 180
TY+++I+++ RWE R +LK+M++ +QPN ++ L+ + G + L+ M
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 181 KSAGLKPSATIYNALIN 231
KS G+KP YN +I+
Sbjct: 436 KSIGVKPDRQFYNVVID 452