BLASTX nr result

ID: Atractylodes21_contig00029951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029951
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD83317.1| Fgenesh protein 73 [Beta vulgaris]                      82   8e-14
ref|NP_190352.1| DNA binding protein [Arabidopsis thaliana] gi|4...    74   1e-11
gb|ACJ84416.1| unknown [Medicago truncatula]                           73   4e-11
ref|XP_003624840.1| 14 kDa zinc-binding protein [Medicago trunca...    72   7e-11
gb|ABN05957.1| Homeodomain-like [Medicago truncatula]                  72   7e-11

>gb|ABD83317.1| Fgenesh protein 73 [Beta vulgaris]
          Length = 412

 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
 Frame = +1

Query: 145 QRFPVVNQEPTIKNLQTTQKVSRTEKWESKEDVALKSAWCIVSENPTHGNNQKRASMWAQ 324
           QR PV +Q P      ++ K      W+  ED  L SA+   S +   G  QK+   W +
Sbjct: 138 QRQPVQSQNPPFPATSSSAK----RVWDQVEDELLVSAFMNTSLDKVSGTYQKKNIFWGK 193

Query: 325 VLELYNESRVEN-TGIGPRNVNQMRGRWKRLNENGNKWVATYREADRQKRSGMSTTGVER 501
           V E + E R+ N T   PRNV+ ++GRW RL     +W A Y EA  +K+SG +   V R
Sbjct: 194 VWEAFEEGRIANPTETAPRNVDMVKGRWSRLAPRVLRWAAFYDEALARKKSGQNDDDVLR 253

Query: 502 EAHAIYAAGGSKY 540
           EAHA++     ++
Sbjct: 254 EAHALHRRKNGRF 266


>ref|NP_190352.1| DNA binding protein [Arabidopsis thaliana]
           gi|4741185|emb|CAB41851.1| hypothetical protein
           [Arabidopsis thaliana] gi|189303599|gb|ACD85799.1|
           At3g47680 [Arabidopsis thaliana]
           gi|332644797|gb|AEE78318.1| DNA binding protein
           [Arabidopsis thaliana]
          Length = 302

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
 Frame = +1

Query: 196 TQKVSRTE-KWESKEDVALKSAWCIVSENPTHGNNQKRASMWAQVLELYNESRVENTGIG 372
           T KV R   KW + ED+ L SAW   S++   GN QK  + W+++   Y  S   N G+ 
Sbjct: 40  TPKVKRERRKWSAGEDLVLVSAWLNTSKDAVIGNEQKGYAFWSRIAAYYGASPKLN-GVE 98

Query: 373 PRNVNQMRGRWKRLNENGNKWVATYREADRQKRSGMSTTGVEREAHAIYAAGGSKY 540
            R    ++ RW ++NE   K+V +Y  A +QK SG +   V   AH IY +   K+
Sbjct: 99  KRETGHIKQRWTKINEGVGKFVGSYEAATKQKSSGQNDDDVVALAHEIYNSEHGKF 154


>gb|ACJ84416.1| unknown [Medicago truncatula]
          Length = 389

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 41/110 (37%), Positives = 61/110 (55%)
 Frame = +1

Query: 190 QTTQKVSRTEKWESKEDVALKSAWCIVSENPTHGNNQKRASMWAQVLELYNESRVENTGI 369
           Q+TQK  RT ++   ED  L  AW IV +N     NQ+  S W ++   YNE R      
Sbjct: 95  QSTQKRKRT-RFTPGEDKVLIQAWLIVPKNAAAEANQRADSFWLRIKNTYNEHRGH---F 150

Query: 370 GPRNVNQMRGRWKRLNENGNKWVATYREADRQKRSGMSTTGVEREAHAIY 519
            PR V+Q++ RW +LN   +K+V  Y+ A  +K+SG S + +  EA+ +Y
Sbjct: 151 KPRGVSQIKSRWHKLNSIVHKFVGCYKVAFEKKKSGSSESDIMGEAYTLY 200


>ref|XP_003624840.1| 14 kDa zinc-binding protein [Medicago truncatula]
           gi|355499855|gb|AES81058.1| 14 kDa zinc-binding protein
           [Medicago truncatula]
          Length = 389

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 41/110 (37%), Positives = 61/110 (55%)
 Frame = +1

Query: 190 QTTQKVSRTEKWESKEDVALKSAWCIVSENPTHGNNQKRASMWAQVLELYNESRVENTGI 369
           Q+TQK  RT ++   ED  L  AW IV +N     NQ+  S W ++   YNE R      
Sbjct: 95  QSTQKRKRT-RFTPGEDKVLIQAWLIVPKNAAAEANQRVDSFWLRIKNTYNEHRGH---F 150

Query: 370 GPRNVNQMRGRWKRLNENGNKWVATYREADRQKRSGMSTTGVEREAHAIY 519
            PR V+Q++ RW +LN   +K+V  Y+ A  +K+SG S + +  EA+ +Y
Sbjct: 151 KPRGVSQIKSRWHKLNSIVHKFVGCYKVAFEKKKSGSSESDIMGEAYTLY 200


>gb|ABN05957.1| Homeodomain-like [Medicago truncatula]
          Length = 357

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 41/110 (37%), Positives = 61/110 (55%)
 Frame = +1

Query: 190 QTTQKVSRTEKWESKEDVALKSAWCIVSENPTHGNNQKRASMWAQVLELYNESRVENTGI 369
           Q+TQK  RT ++   ED  L  AW IV +N     NQ+  S W ++   YNE R      
Sbjct: 63  QSTQKRKRT-RFTPGEDKVLIQAWLIVPKNAAAEANQRVDSFWLRIKNTYNEHRGH---F 118

Query: 370 GPRNVNQMRGRWKRLNENGNKWVATYREADRQKRSGMSTTGVEREAHAIY 519
            PR V+Q++ RW +LN   +K+V  Y+ A  +K+SG S + +  EA+ +Y
Sbjct: 119 KPRGVSQIKSRWHKLNSIVHKFVGCYKVAFEKKKSGSSESDIMGEAYTLY 168


Top