BLASTX nr result

ID: Atractylodes21_contig00029940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029940
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306069.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002526110.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002324106.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>ref|XP_002306069.1| predicted protein [Populus trichocarpa] gi|222849033|gb|EEE86580.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 45/115 (39%), Positives = 56/115 (48%)
 Frame = -3

Query: 355 LSIDLSGPLLVMGSTPRRLRNFPPRKSLXXXXXXXXXXXXXXHNKSTVTRTSSVSDKLEA 176
           +S  L    + +G T RR R  P  +S                +   VT  + VSDK+EA
Sbjct: 1   MSSTLKKSKVSLGRTERRRRRRPHGRSCRAQRSIC--------SGGFVTSPNKVSDKMEA 52

Query: 175 LKNLIXXXXXXXXXXXXXXXXXXXQLFQETADYILLLRTQVSVLQKLVDFYASSS 11
           LKNLI                    LFQETADYI+LLRTQV VL+ L+DFY SS+
Sbjct: 53  LKNLIPATHNGEVKADQ--------LFQETADYIVLLRTQVLVLKGLIDFYGSST 99


>ref|XP_002526110.1| conserved hypothetical protein [Ricinus communis]
           gi|223534607|gb|EEF36304.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/72 (50%), Positives = 44/72 (61%)
 Frame = -3

Query: 223 KSTVTRTSSVSDKLEALKNLIXXXXXXXXXXXXXXXXXXXQLFQETADYILLLRTQVSVL 44
           +S+   +S VS KLEALKNLI                    LFQETADYI+LLRTQV VL
Sbjct: 46  RSSTCSSSKVSHKLEALKNLIPANNGEIVKADQ--------LFQETADYIVLLRTQVFVL 97

Query: 43  QKLVDFYASSSS 8
           Q+L+ FY SS++
Sbjct: 98  QRLIQFYGSSTT 109


>ref|XP_002324106.1| predicted protein [Populus trichocarpa] gi|222867108|gb|EEF04239.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/72 (51%), Positives = 42/72 (58%)
 Frame = -3

Query: 226 NKSTVTRTSSVSDKLEALKNLIXXXXXXXXXXXXXXXXXXXQLFQETADYILLLRTQVSV 47
           N    +  S VSDKLEALKNLI                    LF+ETADYILLLRTQV +
Sbjct: 36  NGGLTSSCSKVSDKLEALKNLIPATCHNGEIVKPDQ------LFKETADYILLLRTQVVL 89

Query: 46  LQKLVDFYASSS 11
           LQ LV+FY SS+
Sbjct: 90  LQGLVEFYGSST 101


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