BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029908
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsi...   113   1e-23
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   112   2e-23
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...   110   2e-22
gb|ABW74571.1| pol polyprotein [Boechera divaricarpa]                  99   5e-19
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      97   2e-18

>gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 780

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/118 (48%), Positives = 79/118 (66%)
 Frame = +2

Query: 2   QQKVSTPFQQFWLSKLMGFDYEIQYRSGQENAAADALSRVSGAEVLCMAVSVISSDLVAL 181
           +Q+++TP QQ WL KL+ FDYEIQY+ G+EN  ADALSRV G+EVL MA+SV+  DL+  
Sbjct: 363 EQRLNTPIQQQWLPKLLEFDYEIQYKQGKENLVADALSRVEGSEVLHMALSVVECDLLKE 422

Query: 182 IKASYQLDTRLV*IITQLQQQMSSSVVYKLQDGLLRKNGRIVVAPDNNLRSKLIEWHH 355
           I+A Y  D  +  IIT LQQQ  S   Y    G+LR+  +IVV  ++ ++  ++ W H
Sbjct: 423 IQAGYVTDGDIQGIITILQQQADSKKHYTWSQGVLRRKNKIVVPNNSGIKDTILRWLH 480


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/118 (46%), Positives = 81/118 (68%)
 Frame = +2

Query: 2    QQKVSTPFQQFWLSKLMGFDYEIQYRSGQENAAADALSRVSGAEVLCMAVSVISSDLVAL 181
            +Q+++TP QQ WL KL+ FDYEIQYR G+EN  ADALSRV G+EVL MA++V+  DL+  
Sbjct: 972  EQRLNTPIQQQWLPKLLEFDYEIQYRQGKENVVADALSRVEGSEVLHMAMTVVECDLLKD 1031

Query: 182  IKASYQLDTRLV*IITQLQQQMSSSVVYKLQDGLLRKNGRIVVAPDNNLRSKLIEWHH 355
            I+A Y  D++L  IIT LQ+   S   +     +LR+  +IVV  ++N+++ ++ W H
Sbjct: 1032 IQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILRRKSKIVVPANDNIKNTILLWLH 1089


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/118 (46%), Positives = 78/118 (66%)
 Frame = +2

Query: 2    QQKVSTPFQQFWLSKLMGFDYEIQYRSGQENAAADALSRVSGAEVLCMAVSVISSDLVAL 181
            +Q+++TP QQ WL KL+ FDYEIQYR G+EN  ADALSRV G+EVL MA+S++  D +  
Sbjct: 943  EQRLNTPVQQQWLPKLLEFDYEIQYRQGKENLVADALSRVEGSEVLHMALSIVECDFLKE 1002

Query: 182  IKASYQLDTRLV*IITQLQQQMSSSVVYKLQDGLLRKNGRIVVAPDNNLRSKLIEWHH 355
            I+ +Y+ D  L  II+ LQQ   +   Y     +LR+  +IVV  D  + +KL++W H
Sbjct: 1003 IQVAYESDGVLKDIISALQQHPDAKKHYSWSQDILRRKSKIVVPNDVEITNKLLQWLH 1060


>gb|ABW74571.1| pol polyprotein [Boechera divaricarpa]
          Length = 450

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/118 (39%), Positives = 78/118 (66%)
 Frame = +2

Query: 2   QQKVSTPFQQFWLSKLMGFDYEIQYRSGQENAAADALSRVSGAEVLCMAVSVISSDLVAL 181
           +Q+++TP QQ  L +L+ FDYEIQYR G+EN A DALSRV GA+VL MA+S++  DL+  
Sbjct: 325 EQRLNTPVQQKMLPRLLEFDYEIQYRQGKENVAVDALSRVDGAKVLHMAMSMLECDLILN 384

Query: 182 IKASYQLDTRLV*IITQLQQQMSSSVVYKLQDGLLRKNGRIVVAPDNNLRSKLIEWHH 355
           I+ +Y+ D  ++ II +L++       Y     +LR+  ++V+  +  +R ++++W H
Sbjct: 385 IQKAYETDAEVMAIIEKLKKDSVFIKNYSWMQDILRRKSKLVIPKNEEVRVEILKWLH 442


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/115 (41%), Positives = 73/115 (63%)
 Frame = +2

Query: 11   VSTPFQQFWLSKLMGFDYEIQYRSGQENAAADALSRVSGAEVLCMAVSVISSDLVALIKA 190
            V+TPFQ  WLSKLMG+ YEIQY+ G+EN AADALSRV+GA++L + +S     L   I+ 
Sbjct: 1031 VTTPFQHMWLSKLMGYTYEIQYKQGKENHAADALSRVTGAQLLSITLSHAHEGLFDSIQL 1090

Query: 191  SYQLDTRLV*IITQLQQQMSSSVVYKLQDGLLRKNGRIVVAPDNNLRSKLIEWHH 355
             +Q D  L  +I+ ++   +S   Y   +  LR+ G++VV  D  ++  +++W H
Sbjct: 1091 LWQSDPHLSKVISDIKSNPASHPAYSFVNEELRRKGKLVVGNDAAVKLHILKWMH 1145