BLASTX nr result

ID: Atractylodes21_contig00029903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029903
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512070.1| RNA binding protein, putative [Ricinus commu...   112   7e-23
ref|XP_002312285.1| predicted protein [Populus trichocarpa] gi|2...   110   4e-22
emb|CBI27295.3| unnamed protein product [Vitis vinifera]              105   1e-20
ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis ...   105   1e-20
ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|2...   104   3e-20

>ref|XP_002512070.1| RNA binding protein, putative [Ricinus communis]
           gi|223549250|gb|EEF50739.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 355

 Score =  112 bits (281), Expect = 7e-23
 Identities = 70/144 (48%), Positives = 87/144 (60%)
 Frame = +3

Query: 195 ASNEMGNLSLQTKNRFSRDLLRRFMVSSSAAGDPRRSDPGEDPGEEVELNLGLSLGGRFG 374
           +S  M +LSL+  N++ RDLL+RFM + S     + S+  ED  EE+ELNLGLSLGGRFG
Sbjct: 14  SSRTMESLSLEI-NKYPRDLLQRFMSNDSQ--QLKTSEGEEDNTEEIELNLGLSLGGRFG 70

Query: 375 VDKSNTKLVRSSSIAAILPVVKXXXXXXXXXXXXXXXXXXSYSSLIRTSSLPVETEEEWR 554
           VDK++ KL RSSSIA  +P+V+                  SY  LIRTSSLP ETEEEWR
Sbjct: 71  VDKTSKKLTRSSSIAGSIPLVR-------DHDAFNTQPAVSYPLLIRTSSLPTETEEEWR 123

Query: 555 KRKELQXXXXXXXXXXXXXXQRNL 626
           KRKE+Q              Q+NL
Sbjct: 124 KRKEMQTLRRMEAKRRRSEKQKNL 147


>ref|XP_002312285.1| predicted protein [Populus trichocarpa] gi|222852105|gb|EEE89652.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  110 bits (275), Expect = 4e-22
 Identities = 71/140 (50%), Positives = 84/140 (60%)
 Frame = +3

Query: 207 MGNLSLQTKNRFSRDLLRRFMVSSSAAGDPRRSDPGEDPGEEVELNLGLSLGGRFGVDKS 386
           M +LSL   NR+ RDLL+RFM S +       SD GE+  EE+ELNLGLSLGGRFGVDKS
Sbjct: 1   MESLSLDI-NRYPRDLLQRFMSSDAQQYQTATSD-GEET-EEIELNLGLSLGGRFGVDKS 57

Query: 387 NTKLVRSSSIAAILPVVKXXXXXXXXXXXXXXXXXXSYSSLIRTSSLPVETEEEWRKRKE 566
           + KL RSSSIA  +P+++                  SY  L+RTSSLP ETEEEWRKRKE
Sbjct: 58  SKKLTRSSSIAGSIPLLR--------DYDALTTPPASYPLLMRTSSLPTETEEEWRKRKE 109

Query: 567 LQXXXXXXXXXXXXXXQRNL 626
           +Q              QRNL
Sbjct: 110 MQSLRRMEAKRRRSEKQRNL 129


>emb|CBI27295.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  105 bits (262), Expect = 1e-20
 Identities = 63/126 (50%), Positives = 72/126 (57%)
 Frame = +3

Query: 246 RDLLRRFMVSSSAAGDPRRSDPGEDPGEEVELNLGLSLGGRFGVDKSNTKLVRSSSIAAI 425
           RDLL+R M +S           GED  EE+ELNLGLSLGGRFGVDKS  KL+RSSSIA  
Sbjct: 6   RDLLQRLMGNSGEQSQYASMVKGEDDPEEIELNLGLSLGGRFGVDKSEKKLMRSSSIAGS 65

Query: 426 LPVVKXXXXXXXXXXXXXXXXXXSYSSLIRTSSLPVETEEEWRKRKELQXXXXXXXXXXX 605
           + + +                  SYSSL+RTSSLP ET+EEWRKRKELQ           
Sbjct: 66  IGITR--------DEDALVTPAVSYSSLMRTSSLPTETQEEWRKRKELQTLRRMEAKRRR 117

Query: 606 XXXQRN 623
              QRN
Sbjct: 118 SEKQRN 123


>ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis vinifera]
          Length = 360

 Score =  105 bits (262), Expect = 1e-20
 Identities = 63/126 (50%), Positives = 72/126 (57%)
 Frame = +3

Query: 246 RDLLRRFMVSSSAAGDPRRSDPGEDPGEEVELNLGLSLGGRFGVDKSNTKLVRSSSIAAI 425
           RDLL+R M +S           GED  EE+ELNLGLSLGGRFGVDKS  KL+RSSSIA  
Sbjct: 13  RDLLQRLMGNSGEQSQYASMVKGEDDPEEIELNLGLSLGGRFGVDKSEKKLMRSSSIAGS 72

Query: 426 LPVVKXXXXXXXXXXXXXXXXXXSYSSLIRTSSLPVETEEEWRKRKELQXXXXXXXXXXX 605
           + + +                  SYSSL+RTSSLP ET+EEWRKRKELQ           
Sbjct: 73  IGITR--------DEDALVTPAVSYSSLMRTSSLPTETQEEWRKRKELQTLRRMEAKRRR 124

Query: 606 XXXQRN 623
              QRN
Sbjct: 125 SEKQRN 130


>ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|222864041|gb|EEF01172.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  104 bits (259), Expect = 3e-20
 Identities = 67/140 (47%), Positives = 84/140 (60%)
 Frame = +3

Query: 207 MGNLSLQTKNRFSRDLLRRFMVSSSAAGDPRRSDPGEDPGEEVELNLGLSLGGRFGVDKS 386
           M +LSL+  NR+ RDL++R ++SS A      +  GE+  EE+ELNLGLSLGGRFGVDK+
Sbjct: 1   MESLSLEI-NRYPRDLVQR-LISSDAQQYKTATSEGEE-AEEIELNLGLSLGGRFGVDKT 57

Query: 387 NTKLVRSSSIAAILPVVKXXXXXXXXXXXXXXXXXXSYSSLIRTSSLPVETEEEWRKRKE 566
           + KL RSSSIA  +P+++                  SY  LIRTSSLP ETEEEWRKRKE
Sbjct: 58  SEKLTRSSSIAGSIPLLR--------DHDALSTPPVSYPFLIRTSSLPTETEEEWRKRKE 109

Query: 567 LQXXXXXXXXXXXXXXQRNL 626
            Q              Q+NL
Sbjct: 110 NQSLRRMEAKRRRSEKQKNL 129


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