BLASTX nr result

ID: Atractylodes21_contig00029873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029873
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28269.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...   115   4e-24
emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]       114   8e-24
ref|XP_002328241.1| transcription factor E2F [Populus trichocarp...   109   3e-22
ref|XP_002312830.1| transcription factor E2F [Populus trichocarp...   106   2e-21

>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = -1

Query: 280 SDVNASEDFVSGIMKIVP-DIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPDN 104
           SD+NAS+DFVSGIMKIVP D+DSDADYWLLSD DVSITDMWRTE    VEWN++  L D+
Sbjct: 359 SDLNASQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPG--VEWNELDALNDD 416

Query: 103 YAMPGVTTPHPQTPTSDALQ 44
           YAM  V+TP PQTP S A +
Sbjct: 417 YAMANVSTPQPQTPPSSAAE 436


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = -1

Query: 280 SDVNASEDFVSGIMKIVP-DIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPDN 104
           SD+NAS+DFVSGIMKIVP D+DSDADYWLLSD DVSITDMWRTE    VEWN++  L D+
Sbjct: 370 SDLNASQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPG--VEWNELDALNDD 427

Query: 103 YAMPGVTTPHPQTPTSDALQ 44
           YAM  V+TP PQTP S A +
Sbjct: 428 YAMANVSTPQPQTPPSSAAE 447


>emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]
          Length = 454

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/88 (61%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
 Frame = -1

Query: 283 CSDVNASEDFVSGIMKIVPDIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPDN 104
           CSD NA +DFVSGIMKIVP++DSDADYWLLSD DVSITDMWRT+S   VEWN++G + ++
Sbjct: 368 CSDANAQQDFVSGIMKIVPEVDSDADYWLLSDADVSITDMWRTDSG--VEWNELGTIHED 425

Query: 103 YAMPGVTTPHPQTPTSDALQ--DANPTG 26
           Y +  V TP PQ+P   A +    N TG
Sbjct: 426 YTVANVGTPQPQSPPPSATEVLPTNTTG 453


>ref|XP_002328241.1| transcription factor E2F [Populus trichocarpa]
           gi|222837756|gb|EEE76121.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 455

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
 Frame = -1

Query: 283 CSDVNASEDFVSGIMKIVP-DIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPD 107
           CS++N + DFVSGIMKIVP D+DSDADYWLLSD  VSITDMWR E    VEWND+  L +
Sbjct: 367 CSELNTAHDFVSGIMKIVPSDVDSDADYWLLSDPGVSITDMWRNEPV--VEWNDLDTLHN 424

Query: 106 NYAMPGVTTPHPQTPTSDALQDANPTGTN 20
           +Y MP V TP PQTP S+  +   P GTN
Sbjct: 425 DYVMPNVCTPQPQTPPSNPTE--VPPGTN 451


>ref|XP_002312830.1| transcription factor E2F [Populus trichocarpa]
           gi|222849238|gb|EEE86785.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 473

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/77 (66%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = -1

Query: 283 CSDVNASEDFVSGIMKIVP-DIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPD 107
           CS+ N S DFVSGIMKIVP D++SDADYWLLSD DVSITDMWR E    VEWND+  L +
Sbjct: 386 CSEPNTSHDFVSGIMKIVPSDVNSDADYWLLSDADVSITDMWRNEPV--VEWNDLDTLHN 443

Query: 106 NYAMPGVTTPHPQTPTS 56
           +Y MP  +TP PQTP++
Sbjct: 444 DYVMPNFSTPQPQTPSN 460


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