BLASTX nr result
ID: Atractylodes21_contig00029873
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00029873 (292 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28269.3| unnamed protein product [Vitis vinifera] 115 4e-24 ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V... 115 4e-24 emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum] 114 8e-24 ref|XP_002328241.1| transcription factor E2F [Populus trichocarp... 109 3e-22 ref|XP_002312830.1| transcription factor E2F [Populus trichocarp... 106 2e-21 >emb|CBI28269.3| unnamed protein product [Vitis vinifera] Length = 446 Score = 115 bits (288), Expect = 4e-24 Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 1/80 (1%) Frame = -1 Query: 280 SDVNASEDFVSGIMKIVP-DIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPDN 104 SD+NAS+DFVSGIMKIVP D+DSDADYWLLSD DVSITDMWRTE VEWN++ L D+ Sbjct: 359 SDLNASQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPG--VEWNELDALNDD 416 Query: 103 YAMPGVTTPHPQTPTSDALQ 44 YAM V+TP PQTP S A + Sbjct: 417 YAMANVSTPQPQTPPSSAAE 436 >ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera] Length = 457 Score = 115 bits (288), Expect = 4e-24 Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 1/80 (1%) Frame = -1 Query: 280 SDVNASEDFVSGIMKIVP-DIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPDN 104 SD+NAS+DFVSGIMKIVP D+DSDADYWLLSD DVSITDMWRTE VEWN++ L D+ Sbjct: 370 SDLNASQDFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPG--VEWNELDALNDD 427 Query: 103 YAMPGVTTPHPQTPTSDALQ 44 YAM V+TP PQTP S A + Sbjct: 428 YAMANVSTPQPQTPPSSAAE 447 >emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum] Length = 454 Score = 114 bits (285), Expect = 8e-24 Identities = 54/88 (61%), Positives = 66/88 (75%), Gaps = 2/88 (2%) Frame = -1 Query: 283 CSDVNASEDFVSGIMKIVPDIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPDN 104 CSD NA +DFVSGIMKIVP++DSDADYWLLSD DVSITDMWRT+S VEWN++G + ++ Sbjct: 368 CSDANAQQDFVSGIMKIVPEVDSDADYWLLSDADVSITDMWRTDSG--VEWNELGTIHED 425 Query: 103 YAMPGVTTPHPQTPTSDALQ--DANPTG 26 Y + V TP PQ+P A + N TG Sbjct: 426 YTVANVGTPQPQSPPPSATEVLPTNTTG 453 >ref|XP_002328241.1| transcription factor E2F [Populus trichocarpa] gi|222837756|gb|EEE76121.1| transcription factor E2F [Populus trichocarpa] Length = 455 Score = 109 bits (272), Expect = 3e-22 Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 1/89 (1%) Frame = -1 Query: 283 CSDVNASEDFVSGIMKIVP-DIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPD 107 CS++N + DFVSGIMKIVP D+DSDADYWLLSD VSITDMWR E VEWND+ L + Sbjct: 367 CSELNTAHDFVSGIMKIVPSDVDSDADYWLLSDPGVSITDMWRNEPV--VEWNDLDTLHN 424 Query: 106 NYAMPGVTTPHPQTPTSDALQDANPTGTN 20 +Y MP V TP PQTP S+ + P GTN Sbjct: 425 DYVMPNVCTPQPQTPPSNPTE--VPPGTN 451 >ref|XP_002312830.1| transcription factor E2F [Populus trichocarpa] gi|222849238|gb|EEE86785.1| transcription factor E2F [Populus trichocarpa] Length = 473 Score = 106 bits (264), Expect = 2e-21 Identities = 51/77 (66%), Positives = 60/77 (77%), Gaps = 1/77 (1%) Frame = -1 Query: 283 CSDVNASEDFVSGIMKIVP-DIDSDADYWLLSDVDVSITDMWRTESSVDVEWNDMGMLPD 107 CS+ N S DFVSGIMKIVP D++SDADYWLLSD DVSITDMWR E VEWND+ L + Sbjct: 386 CSEPNTSHDFVSGIMKIVPSDVNSDADYWLLSDADVSITDMWRNEPV--VEWNDLDTLHN 443 Query: 106 NYAMPGVTTPHPQTPTS 56 +Y MP +TP PQTP++ Sbjct: 444 DYVMPNFSTPQPQTPSN 460