BLASTX nr result

ID: Atractylodes21_contig00029811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029811
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB75932.1| putative protein [Arabidopsis thaliana]               120   1e-25
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   114   8e-24
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   114   8e-24
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   112   3e-23
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]   112   3e-23

>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  120 bits (302), Expect = 1e-25
 Identities = 53/93 (56%), Positives = 74/93 (79%)
 Frame = -2

Query: 290  QKKYAPEVLRRFGMDNCNAVYNPLIAGSKISKDDDGESIDSTNYKQLIGSLVYLTTACPD 111
            Q++YA EVL RFGMD  NAV NP++ G+K++KD++GE +D T +KQL+GSL+YLT   PD
Sbjct: 1072 QRRYAREVLARFGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPD 1131

Query: 110  LMFSVCLVSRYMTQPKLNHLMAAK*ILHYADGT 12
            LM+ VCL+SR+M+ P+++H +AAK IL Y  GT
Sbjct: 1132 LMYGVCLISRFMSNPRMSHWLAAKRILRYLKGT 1164


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  114 bits (286), Expect = 8e-24
 Identities = 55/107 (51%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
 Frame = -2

Query: 326  GHQNLRDEAGGY--QKKYAPEVLRRFGMDNCNAVYNPLIAGSKISKDDDGESIDSTNYKQ 153
            G + ++DE G +  Q+KYA E+++++GM+ CN+V NP++ G K++K   G+++D T +KQ
Sbjct: 1057 GVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQ 1116

Query: 152  LIGSLVYLTTACPDLMFSVCLVSRYMTQPKLNHLMAAK*ILHYADGT 12
            LIGSL YLTT  PDL+FSV LVSRYM  P   HL+A K IL Y  GT
Sbjct: 1117 LIGSLRYLTTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQGT 1163


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
            gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1334

 Score =  114 bits (286), Expect = 8e-24
 Identities = 55/107 (51%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
 Frame = -2

Query: 326  GHQNLRDEAGGY--QKKYAPEVLRRFGMDNCNAVYNPLIAGSKISKDDDGESIDSTNYKQ 153
            G + ++DE G +  Q+KYA E+++++GM+ CN+V NP++ G K++K   G+++D T +KQ
Sbjct: 1057 GVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQ 1116

Query: 152  LIGSLVYLTTACPDLMFSVCLVSRYMTQPKLNHLMAAK*ILHYADGT 12
            LIGSL YLTT  PDL+FSV LVSRYM  P   HL+A K IL Y  GT
Sbjct: 1117 LIGSLRYLTTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQGT 1163


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  112 bits (281), Expect = 3e-23
 Identities = 52/93 (55%), Positives = 68/93 (73%)
 Frame = -2

Query: 290  QKKYAPEVLRRFGMDNCNAVYNPLIAGSKISKDDDGESIDSTNYKQLIGSLVYLTTACPD 111
            Q+KYA EVL RF +  CN V+NP++ G K+++D +G  +D T YKQ++GSL+YLT   PD
Sbjct: 824  QRKYAQEVLERFNLYQCNPVHNPVVPGFKLTRDKEGVEVDGTLYKQMVGSLMYLTATRPD 883

Query: 110  LMFSVCLVSRYMTQPKLNHLMAAK*ILHYADGT 12
            LMFSV L+SRYM  P  +HL+AAK IL Y  GT
Sbjct: 884  LMFSVSLISRYMEHPTESHLLAAKRILRYVKGT 916


>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
          Length = 1084

 Score =  112 bits (281), Expect = 3e-23
 Identities = 54/106 (50%), Positives = 75/106 (70%), Gaps = 2/106 (1%)
 Frame = -2

Query: 326  GHQNLRDEAGGY--QKKYAPEVLRRFGMDNCNAVYNPLIAGSKISKDDDGESIDSTNYKQ 153
            G + L++  G Y  Q+KYA EVL RFGM+  N+V NP++ G +++K++ G  +D+T YKQ
Sbjct: 831  GVEVLQNSEGIYISQRKYAKEVLERFGMEKSNSVKNPIVPGDRLTKNEGGVKVDATKYKQ 890

Query: 152  LIGSLVYLTTACPDLMFSVCLVSRYMTQPKLNHLMAAK*ILHYADG 15
            L+GSL+YLTT  PDLM+ VCL+SR+M  P   HL AAK +L Y  G
Sbjct: 891  LVGSLMYLTTTRPDLMYVVCLISRFMASPTEMHLQAAKRVLRYLKG 936


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