BLASTX nr result

ID: Atractylodes21_contig00029756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029756
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   110   2e-22
ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc...    99   3e-19
ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cuc...    99   3e-19
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    99   5e-19
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    97   2e-18

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score =  110 bits (274), Expect = 2e-22
 Identities = 64/139 (46%), Positives = 90/139 (64%)
 Frame = +3

Query: 3   ASNDDLLIQILRRLPVTAVLRFKSVSKHWRSLLSHRRFTLLYDQVSPSPGFFVRNLYIPF 182
           ASNDDLL ++L RLP+ ++L+FKSVSKHW SL++   F+   + + P+P   + + ++P 
Sbjct: 18  ASNDDLLSELLLRLPIKSLLKFKSVSKHWLSLITDPHFSRRKN-LKPNPVSALFS-FVPL 75

Query: 183 DDENRSTPPFRSLDFDPDLCGIRIVQSCNGLLLCCSKQGNERDRKYYVFNPTTKQFAIIP 362
           D    S P F SL F     GI I+QSCNGL  C S   N+ +RKYY++NPTTKQF  +P
Sbjct: 76  DPLQTSAP-FTSLTFVDHPRGIEILQSCNGLFCCSSVDYNDSERKYYIYNPTTKQFTTLP 134

Query: 363 SVPGGRDVRKTIRFMGLAF 419
            +  GR VR+ +  + LAF
Sbjct: 135 PL-CGRSVRRVLG-VNLAF 151


>ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 61/134 (45%), Positives = 73/134 (54%), Gaps = 11/134 (8%)
 Frame = +3

Query: 9   NDDLLIQILRRLPVTAVLRFKSVSKHWRSLLS-----HRRFTLLYDQVSPSPGFFVRNL- 170
           NDDL  QIL RLP+ ++LRFKSVSK W SL+S     HRR    +   +PS  FF R   
Sbjct: 19  NDDLFFQILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIFFPRPTP 78

Query: 171 -YIPFD----DENRSTPPFRSLDFDPDLCGIRIVQSCNGLLLCCSKQGNERDRKYYVFNP 335
              PFD      N S PPF S  F  D  G  I+QSCNGL LC +  GN   R +Y+ NP
Sbjct: 79  KSPPFDFINFTTNPSRPPFESPHFADDKHGFLILQSCNGLFLCSTYNGNYSTRDFYIHNP 138

Query: 336 TTKQFAIIPSVPGG 377
           TT     +P +  G
Sbjct: 139 TTNHHTKLPYLQVG 152


>ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 61/134 (45%), Positives = 73/134 (54%), Gaps = 11/134 (8%)
 Frame = +3

Query: 9   NDDLLIQILRRLPVTAVLRFKSVSKHWRSLLS-----HRRFTLLYDQVSPSPGFFVRNL- 170
           NDDL  QIL RLP+ ++LRFKSVSK W SL+S     HRR    +   +PS  FF R   
Sbjct: 19  NDDLFFQILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIFFPRPTP 78

Query: 171 -YIPFD----DENRSTPPFRSLDFDPDLCGIRIVQSCNGLLLCCSKQGNERDRKYYVFNP 335
              PFD      N S PPF S  F  D  G  I+QSCNGL LC +  GN   R +Y+ NP
Sbjct: 79  KSPPFDFINFTTNPSRPPFESPHFADDKHGFLILQSCNGLFLCSTYNGNYSTRDFYIHNP 138

Query: 336 TTKQFAIIPSVPGG 377
           TT     +P +  G
Sbjct: 139 TTNHHTKLPYLQVG 152


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 61/154 (39%), Positives = 87/154 (56%), Gaps = 9/154 (5%)
 Frame = +3

Query: 3   ASNDDLLIQILRRLPVTAVLRFKSVSKHWRSLLSHRRFTLLYDQVSPS--PGFFV----R 164
           A N DLL +I  R PV  +LRF+SVSK W SL+S   F   + + S +  PG  +     
Sbjct: 33  AGNGDLLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCHRHARRSSASVPGVLLGLPNS 92

Query: 165 NL-YIPFDDENRSTPPFRSLDFDPDLCGIRIVQSCNGLLLCCSKQGNERDRKYYVFNPTT 341
           N  +I FD++  S PP RSLDF  D  G++++Q CNGLL C + +     R YY+ N  T
Sbjct: 93  NFDFISFDEKKASEPPLRSLDFIGDPLGVKVLQVCNGLLCCSTVRSLGTSRNYYICNLAT 152

Query: 342 KQFAII--PSVPGGRDVRKTIRFMGLAFHQTHCP 437
           ++F+++  P   GGRD   T+  + LAF  +  P
Sbjct: 153 RRFSVLPPPCSSGGRD---TVFGINLAFDPSKSP 183


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 60/145 (41%), Positives = 80/145 (55%), Gaps = 9/145 (6%)
 Frame = +3

Query: 6   SNDDLLIQILRRLPVTAVLRFKSVSKHWRSLLSHRRFTLLYDQVSPS---PGFFVRNLYI 176
           SN+DL+ QIL RLPV  +LRFKSVSK W SL+S   F+ L+   +P+      F+RN  +
Sbjct: 12  SNEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNHTISALFLRNSPL 71

Query: 177 PF------DDENRSTPPFRSLDFDPDLCGIRIVQSCNGLLLCCSKQGNERDRKYYVFNPT 338
            F         + S+     L FD    GI+I+QSCNGLLLC +     + R YY+ NPT
Sbjct: 72  EFKFLSLSSSSSSSSSSASPLSFDL-FHGIKILQSCNGLLLCSTLPKIGQKRNYYISNPT 130

Query: 339 TKQFAIIPSVPGGRDVRKTIRFMGL 413
           TKQ   +PS+ G  +        GL
Sbjct: 131 TKQMFTLPSLVGDANAASPTTLFGL 155


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