BLASTX nr result

ID: Atractylodes21_contig00029682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029682
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159559.1| PREDICTED: F-box protein SKIP14-like [Cucumi...    86   3e-15
ref|XP_004142948.1| PREDICTED: F-box protein SKIP14-like [Cucumi...    86   3e-15
emb|CBI27542.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...    70   2e-10
ref|XP_004135509.1| PREDICTED: F-box protein SKIP14-like [Cucumi...    65   4e-09

>ref|XP_004159559.1| PREDICTED: F-box protein SKIP14-like [Cucumis sativus]
          Length = 491

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/85 (54%), Positives = 56/85 (65%)
 Frame = +1

Query: 139 MALNYSQRPIFPAHTSEDNLVSPLRIVNGGYAVEGMSEKGGEGFVKPTHGHGELHDRFGH 318
           MALN+S RP+ P H SEDNLVSP+RI N GY VEG+ E   EG  KP H   E+ D F H
Sbjct: 1   MALNFSCRPLIPLHLSEDNLVSPMRIAN-GYIVEGIPENNAEGCRKPWHRGQEVDDCFDH 59

Query: 319 GREIVDKSGSPDSVPKDIIDLLPSD 393
           G++    S S D V KDI+ +LP+D
Sbjct: 60  GKDSCSDS-SQDPVSKDILHILPAD 83


>ref|XP_004142948.1| PREDICTED: F-box protein SKIP14-like [Cucumis sativus]
          Length = 497

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/85 (54%), Positives = 56/85 (65%)
 Frame = +1

Query: 139 MALNYSQRPIFPAHTSEDNLVSPLRIVNGGYAVEGMSEKGGEGFVKPTHGHGELHDRFGH 318
           MALN+S RP+ P H SEDNLVSP+RI N GY VEG+ E   EG  KP H   E+ D F H
Sbjct: 1   MALNFSCRPLIPLHLSEDNLVSPMRIAN-GYIVEGIPENNAEGCRKPWHRGREVDDCFDH 59

Query: 319 GREIVDKSGSPDSVPKDIIDLLPSD 393
           G++    S S D V KDI+ +LP+D
Sbjct: 60  GKDSCSDS-SQDPVSKDILHILPAD 83


>emb|CBI27542.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/86 (47%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +1

Query: 139 MALNYSQRPIFPAHTSEDNLVSPLRIVNGGYAVEGMSEKGGEGFVKPTHGHGELHDRFGH 318
           MALN+S RPIFPAH +EDNLVSP+RI N                       GE+ D F +
Sbjct: 1   MALNFSHRPIFPAHLAEDNLVSPIRIAN-----------------------GEVADCFDY 37

Query: 319 GREIVDKSGS-PDSVPKDIIDLLPSD 393
           GR+  D+ GS  +SV  DI+DLLPSD
Sbjct: 38  GRDRDDRGGSQQESVSNDILDLLPSD 63


>ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 458

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/86 (47%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +1

Query: 139 MALNYSQRPIFPAHTSEDNLVSPLRIVNGGYAVEGMSEKGGEGFVKPTHGHGELHDRFGH 318
           MALN+S RPIFPAH +EDNLVSP+RI N                       GE+ D F +
Sbjct: 1   MALNFSHRPIFPAHLAEDNLVSPIRIAN-----------------------GEVADCFDY 37

Query: 319 GREIVDKSGS-PDSVPKDIIDLLPSD 393
           GR+  D+ GS  +SV  DI+DLLPSD
Sbjct: 38  GRDRDDRGGSQQESVSNDILDLLPSD 63


>ref|XP_004135509.1| PREDICTED: F-box protein SKIP14-like [Cucumis sativus]
          Length = 767

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/85 (41%), Positives = 53/85 (62%)
 Frame = +1

Query: 139 MALNYSQRPIFPAHTSEDNLVSPLRIVNGGYAVEGMSEKGGEGFVKPTHGHGELHDRFGH 318
           MALN+S RPIFP+H +E+NLVS + I + G+ V+ +SE+  + +      + EL D    
Sbjct: 1   MALNFSHRPIFPSHLTEENLVSSMNI-SSGFVVDDVSERNFDVYGTSWLINRELVDCLNF 59

Query: 319 GREIVDKSGSPDSVPKDIIDLLPSD 393
             +  +  G+ D VP D++DLLPSD
Sbjct: 60  LEDTCEGGGTRDCVPGDVLDLLPSD 84


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