BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029643
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcript...    75   6e-12
ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr...    74   1e-11
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    72   5e-11
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    72   5e-11
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana] gi|3184287|gb|AAC18934.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|330250497|gb|AEC05591.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein [Arabidopsis
           thaliana]
          Length = 211

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/87 (39%), Positives = 50/87 (57%)
 Frame = +1

Query: 1   VEFSSKLIWCSMMPREGRVDWYNTVWPKVIIPKHAFILWLAVRGGLRTQDKLLIWKHIPP 180
           ++  +   W  + P   RVDW+  +W K  IPKHAFI W+ +R  L T+D+++ W  I P
Sbjct: 23  IDLEATATWLHLNPIGERVDWFKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFP 82

Query: 181 DARCSFCGLEPDSIGHLFFLCGFAKDV 261
              C FC    ++  HLFF C FA++V
Sbjct: 83  PL-CLFCNTHDETRQHLFFDCEFAREV 108


>ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis
           thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 209

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   VEFSSKLIWCSMMPREGRVDWYNTVWPKVIIPKHAFILWLAVRGGLRTQDKLLIW-KHIP 177
           V FSS   W  + P   +VDW+  +W K  IPKHAFI W+ +R  L T+DKLL W  H+P
Sbjct: 124 VGFSSAATWIHLNPVGEKVDWHKAIWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVP 183

Query: 178 PDARCSFCGLEPDSIGHLFFLCGFAKDV 261
             + C  C    ++  HLFF C FA ++
Sbjct: 184 --SLCLLCNAFDETRQHLFFDCVFAGEI 209


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
 Frame = +1

Query: 7   FSSKLIWCSMMPREGRVDWYNTVWPKVIIPKHAFILWLAVRGGLRTQDKLLIWKHIPPDA 186
           FS+K  W     ++ R +WY  +W     PK++FI WLA +  L T D+++ W +   + 
Sbjct: 257 FSTKETWADTREQKPRNEWYQGIWFSHATPKYSFITWLATKNRLSTGDRMMSW-NAGVNL 315

Query: 187 RCSFCGLEPDSIGHLFFLCGFAKDV*GSVKVMAGMVNVSDNWEEILSFY--KQLGNN 351
            C FC  + ++  HLFF C ++++V   +       + S +W  IL     K LGNN
Sbjct: 316 SCVFCQEQTETRNHLFFTCRYSREVWSGLTSKLLTRHYSTDWTTILKLLTDKTLGNN 372


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/85 (41%), Positives = 47/85 (55%)
 Frame = +1

Query: 7   FSSKLIWCSMMPREGRVDWYNTVWPKVIIPKHAFILWLAVRGGLRTQDKLLIWKHIPPDA 186
           FS+K  W  +     +V WY  VW    IPKHAF +WLAV   L T D++ +W ++  DA
Sbjct: 287 FSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLW-NMGVDA 345

Query: 187 RCSFCGLEPDSIGHLFFLCGFAKDV 261
            C  C    +S  HLFF C FA ++
Sbjct: 346 TCILCNKALESRDHLFFSCPFATEI 370


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/104 (34%), Positives = 56/104 (53%)
 Frame = +1

Query: 7   FSSKLIWCSMMPREGRVDWYNTVWPKVIIPKHAFILWLAVRGGLRTQDKLLIWKHIPPDA 186
           FS K+ W  +      V+W++ VW K  +P+H+F+LW+AV+  L TQDKL  +    P+ 
Sbjct: 324 FSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPN- 382

Query: 187 RCSFCGLEPDSIGHLFFLCGFAKDV*GSVKVMAGMVNVSDNWEE 318
           RCS C    +   HLFF C + K +   V     +  ++  W+E
Sbjct: 383 RCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDE 426