BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029629
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309928.1| chromatin remodeling complex subunit [Populu...    64   5e-08
ref|XP_004159269.1| PREDICTED: DNA excision repair protein ERCC-...    60   7e-07
ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-...    60   7e-07
ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-...    60   7e-07

>ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222852831|gb|EEE90378.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1108

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 46/126 (36%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
 Frame = +3

Query: 357 DLASQHEGGKHQKVKIHGRRRLCKAXXXXXXXXXXFHDIESDFSAG-VSEFHSPSSVKNT 533
           D  S  E  K  KV+I GRRRLCK             +++ D S   +++F SP   K+ 
Sbjct: 78  DFDSSPEEEKPTKVRIEGRRRLCKVSSGDDGDDASREEVKDDSSFDDIADFDSPIPSKSV 137

Query: 534 E--GNLDGGDEIRDILSNLSSRLEFLSIEKRSRPNKQLPSSSVSLIKENFNQQKAVETSE 707
              GN  G +EI+DILS+L+SRL+ LSIEK+  P             EN N  K V   E
Sbjct: 138 GDCGNNKGVNEIKDILSDLTSRLDLLSIEKKRVP-------------ENNNVVKKVHVVE 184

Query: 708 YVDVDN 725
           Y   ++
Sbjct: 185 YASAES 190


>ref|XP_004159269.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis
           sativus]
          Length = 565

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
 Frame = +3

Query: 384 KHQKVKIHGRRRLCKAXXXXXXXXXX---FHDIESDFSAGVSEFHSPSSVKN--TEGNLD 548
           K  KVKI+GRRRLCK              F+    +FS G+++F SPS       E  ++
Sbjct: 41  KPTKVKINGRRRLCKLSSREDDCLDNPEGFYFNAPNFS-GITDFDSPSPPPPLPVENRVN 99

Query: 549 GGDEIRDILSNLSSRLEFLSIEKRSRPNKQLPS 647
            G EIRDIL++LS+RLE LS+EKR    K++ S
Sbjct: 100 KGSEIRDILNDLSARLELLSVEKRREKPKKVDS 132


>ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis
           sativus]
          Length = 1016

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
 Frame = +3

Query: 384 KHQKVKIHGRRRLCKAXXXXXXXXXX---FHDIESDFSAGVSEFHSPSSVKN--TEGNLD 548
           K  KVKI+GRRRLCK              F+    +FS G+++F SPS       E  ++
Sbjct: 41  KPTKVKINGRRRLCKLSSRENDCLDNPEGFYFNAPNFS-GITDFDSPSPPPPLPVENRVN 99

Query: 549 GGDEIRDILSNLSSRLEFLSIEKRSRPNKQLPS 647
            G EIRDIL++LS+RLE LS+EKR    K++ S
Sbjct: 100 KGSEIRDILNDLSARLELLSVEKRREKPKKVDS 132


>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
           gi|296088517|emb|CBI37508.3| unnamed protein product
           [Vitis vinifera]
          Length = 1043

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
 Frame = +3

Query: 375 EGGKHQKVKIHGRRRLCKAXXXXXXXXXXFHD--IESDFSAGVSEFHSPSSVKNTEGNLD 548
           E  K  KVK+ GRRRLCK             D   E  FS  +S+F SP    N      
Sbjct: 59  EEEKPVKVKLQGRRRLCKLSSNDDDENTKTGDGFYEPKFSE-ISDFDSPHHCSNA----- 112

Query: 549 GGDEIRDILSNLSSRLEFLSIEKRSRP---NKQLPSSSVSLIKENFNQQKAVETSEYVDV 719
           GG+EIR IL++LSSRLE LSIE +  P   ++   S + +      NQ+K ++  EY   
Sbjct: 113 GGNEIRGILNDLSSRLESLSIETKRNPKRADQTRESLNFAAADVAINQEKKLDVPEYASA 172

Query: 720 DNT 728
            ++
Sbjct: 173 SSS 175