BLASTX nr result

ID: Atractylodes21_contig00029580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029580
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]    37   8e-06

>emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]
          Length = 2095

 Score = 37.4 bits (85), Expect(3) = 8e-06
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 52   RITIRDGTGSR--F*EDKWLGVDPLRERFPRLWYLEMDKRVMISD 180
            R+    G G R  F +DKW G  PL E FP L+ + M K   +SD
Sbjct: 1811 RVAFHLGNGQRVKFWKDKWCGDGPLCESFPSLFSISMSKNAWVSD 1855



 Score = 28.9 bits (63), Expect(3) = 8e-06
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 242  LQGLTALLQTVPFDTGTRDRWSWTLGLDGTFSVKRLRNMIE 364
            L+ L   +Q         DR  WT   DG FSV+ L +M+E
Sbjct: 1882 LERLLQKIQAXRVQREEEDRVIWTASKDGVFSVRXLYSMME 1922



 Score = 28.5 bits (62), Expect(3) = 8e-06
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
 Frame = +1

Query: 484  LYDRGFDLDSRLCPICGNDF*TLVHCFVNRHYSSRI*HSIFHWWGWNFHSNTSINDILDS 663
            L  RGF L +R C +C ++  T+ H  ++   +  + + +F  +G ++  + S+   L  
Sbjct: 1961 LQRRGFSLANR-CFLCLSEEETVDHLLLHCIKTRVLWNLLFSLFGISWTLSCSVKATLXG 2019

Query: 664  SN--FQG--------LVPSCIMLRKTVIYSAFYLIWRSRNLLVFG 768
             N  F G        + P CI          F+ +W+ RN L FG
Sbjct: 2020 WNGGFVGKRXKKAWQMAPLCI----------FWTVWKERNRLAFG 2054


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